ENSDARG00000036510


Danio rerio

Features
Gene ID: ENSDARG00000036510
  
Biological name :ccnt2b
  
Synonyms : ccnt2b / cyclin T2b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 12161738
Gene end: 12177012
  
Corresponding Affymetrix probe sets: Dr.24318.1.S1_at (Zebrafish Array)   NM_212586_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000053044
Ensembl peptide - ENSDARP00000115665
Ensembl peptide - ENSDARP00000134438
NCBI entrez gene - 321464     See in Manteia.
RefSeq - NM_212586
RefSeq Peptide - NP_997751
swissprot - F1Q7W1
swissprot - A0A0R4II93
swissprot - Q802D2
ZFIN ID - ZDB-GENE-030131-183
Ensembl - ENSDARG00000036510
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccnt2a / cyclin T2a / CCNT2* / O60583* / Q7TQK0* / cyclin T2*ENSDARG0000003668560
ccnt1 / cyclin T1 / O60563* / Q9QWV9*ENSDARG0000001752549
ccnl1a / cyclin L1a / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000005512418
ccnk / cyclin K / O75909*ENSDARG0000003414617
ccnl1b / cyclin L1b / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000001214015
ccnc / cyclin C / P24863* / Q62447*ENSDARG0000000960711
ccnq / cyclin Q / Fam58b* / Q8QZR8* / Q8N1B3* / family with sequence similarity 58, member B*ENSDARG000000375379


Protein motifs (from Interpro)
Interpro ID Name
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like
 IPR028862  Cyclin-T2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 cellular_componentGO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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