ENSDARG00000012140


Danio rerio

Features
Gene ID: ENSDARG00000012140
  
Biological name :ccnl1b
  
Synonyms : ccnl1b / cyclin L1b
  
Possible biological names infered from orthology : CCNL1 / cyclin L1 / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA. / Q52KE7 / Q9UK58
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 36664173
Gene end: 36674005
  
Corresponding Affymetrix probe sets: Dr.12199.1.S1_at (Zebrafish Array)   NM_199740_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000021380
NCBI entrez gene - 326088     See in Manteia.
RefSeq - NM_199740
RefSeq - XM_009298635
RefSeq Peptide - NP_956034
swissprot - B8JJS9
ZFIN ID - ZDB-GENE-030131-4813
Ensembl - ENSDARG00000012140
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCNL1ENSGALG00000009699Gallus gallus
 CCNL1ENSG00000163660Homo sapiens
 Ccnl1ENSMUSG00000027829Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccnl1a / cyclin L1a / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000005512468
ccnk / cyclin K / O75909*ENSDARG0000003414618
ccnt1 / cyclin T1 / O60563* / Q9QWV9*ENSDARG0000001752518
ccnt2a / cyclin T2a / CCNT2* / O60583* / Q7TQK0* / cyclin T2*ENSDARG0000003668518
ccnt2b / cyclin T2bENSDARG0000003651017
ccnc / cyclin C / P24863* / Q62447*ENSDARG0000000960714
ccnq / cyclin Q / Fam58b* / Q8QZR8* / Q8N1B3* / family with sequence similarity 58, member B*ENSDARG0000003753714


Protein motifs (from Interpro)
Interpro ID Name
 IPR004367  Cyclin, C-terminal domain
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like
 IPR015431  Cyclin L1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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