ENSMUSG00000027829


Mus musculus

Features
Gene ID: ENSMUSG00000027829
  
Biological name :Ccnl1
  
Synonyms : Ccnl1 / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA. / Q52KE7
  
Possible biological names infered from orthology : cyclin L1 / Q9UK58
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: E1
Gene start: 65946151
Gene end: 65958249
  
Corresponding Affymetrix probe sets: 10498531 (MoGene1.0st)   1423622_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000122824
Ensembl peptide - ENSMUSP00000029416
Ensembl peptide - ENSMUSP00000118377
Ensembl peptide - ENSMUSP00000118394
Ensembl peptide - ENSMUSP00000119229
Ensembl peptide - ENSMUSP00000122314
NCBI entrez gene - 56706     See in Manteia.
MGI - MGI:1922664
RefSeq - XM_017319660
RefSeq - NM_001355432
RefSeq - NM_019937
RefSeq - XM_006501767
RefSeq - XM_006501768
RefSeq Peptide - NP_001342361
RefSeq Peptide - NP_064321
swissprot - F7BI63
swissprot - F6WYR6
swissprot - Q52KE7
swissprot - F7BER3
swissprot - F6WST0
Ensembl - ENSMUSG00000027829
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccnl1aENSDARG00000055124Danio rerio
 ccnl1bENSDARG00000012140Danio rerio
 CCNL1ENSGALG00000009699Gallus gallus
 CCNL1ENSG00000163660Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ccnl2 / Q9JJA7 / Cyclin-L2 / Q96S94*ENSMUSG0000002906859
Ccnt2 / Q7TQK0 / Cyclin-T2 / O60583*ENSMUSG0000002634922
Ccnt1 / Q9QWV9 / Cyclin-T1 / O60563*ENSMUSG0000001196021
Ccnk / cyclin K / O75909*ENSMUSG0000002125818
Ccnc / Q62447 / Cyclin-C / P24863*ENSMUSG0000002825214
Fam58b / Q8QZR8 / family with sequence similarity 58, member B / CCNQ* / Q8N1B3* / cyclin Q*ENSMUSG0000004948912


Protein motifs (from Interpro)
Interpro ID Name
 IPR004367  Cyclin, C-terminal domain
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like
 IPR015431  Cyclin L1
 IPR036915  Cyclin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 cellular_componentGO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0008023 transcription elongation factor complex ISO
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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