ENSDARG00000034146


Danio rerio

Features
Gene ID: ENSDARG00000034146
  
Biological name :ccnk
  
Synonyms : ccnk / cyclin K
  
Possible biological names infered from orthology : O75909
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 5074118
Gene end: 5094423
  
Corresponding Affymetrix probe sets: Dr.6880.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000095353
Ensembl peptide - ENSDARP00000113893
swissprot - F1QMB9
swissprot - Q5RGW5
ZFIN ID - ZDB-GENE-030131-5126
Ensembl - ENSDARG00000034146
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCNKENSGALG00000011138Gallus gallus
 CCNKENSG00000090061Homo sapiens
 CcnkENSMUSG00000021258Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccnt1 / cyclin T1 / O60563* / Q9QWV9*ENSDARG0000001752521
ccnt2a / cyclin T2a / CCNT2* / O60583* / Q7TQK0* / cyclin T2*ENSDARG0000003668520
ccnt2b / cyclin T2bENSDARG0000003651019
ccnl1b / cyclin L1b / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000001214017
ccnl1a / cyclin L1a / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000005512417
ccnc / cyclin C / P24863* / Q62447*ENSDARG0000000960715
ccnq / cyclin Q / Fam58b* / Q8QZR8* / Q8N1B3* / family with sequence similarity 58, member B*ENSDARG0000003753710


Protein motifs (from Interpro)
Interpro ID Name
 IPR004367  Cyclin, C-terminal domain
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 cellular_componentGO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IBA


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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