ENSGALG00000011138


Gallus gallus

Features
Gene ID: ENSGALG00000011138
  
Biological name :CCNK
  
Synonyms : CCNK / cyclin-K
  
Possible biological names infered from orthology : O75909
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 48083436
Gene end: 48096133
  
Corresponding Affymetrix probe sets: GgaAffx.12009.1.S1_s_at (Chicken Array)   GgaAffx.7070.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018144
NCBI entrez gene - 423446     See in Manteia.
RefSeq - NM_001031209
RefSeq - XM_015287468
RefSeq Peptide - NP_001026380
swissprot - F1NCA1
Ensembl - ENSGALG00000011138
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccnkENSDARG00000034146Danio rerio
 CCNKENSG00000090061Homo sapiens
 CcnkENSMUSG00000021258Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CCNT2 / cyclin T2 / O60583* / Q7TQK0*ENSGALG0000001220722
CCNL2 / cyclin-L1 / Q96S94* / Q9JJA7* / cyclin L2*ENSGALG0000000155117
CCNL1 / cyclin L1 / Q52KE7* / Q9UK58* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSGALG0000000969916
CCNC / P55168 / Cyclin-C / P24863* / Q62447*ENSGALG0000001547113


Protein motifs (from Interpro)
Interpro ID Name
 IPR004367  Cyclin, C-terminal domain
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0044828 negative regulation by host of viral genome replication IEA
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0071157 negative regulation of cell cycle arrest IEA
 biological_processGO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 biological_processGO:2001165 positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues IEA
 cellular_componentGO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA
 cellular_componentGO:0002944 cyclin K-CDK12 complex IEA
 cellular_componentGO:0002945 cyclin K-CDK13 complex IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0004693 cyclin-dependent protein serine/threonine kinase activity IEA
 molecular_functionGO:0008353 RNA polymerase II carboxy-terminal domain kinase activity IEA
 molecular_functionGO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IBA
 molecular_functionGO:0019901 protein kinase binding IEA


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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