ENSGALG00000015471


Gallus gallus

Features
Gene ID: ENSGALG00000015471
  
Biological name :CCNC
  
Synonyms : CCNC / Cyclin-C / P55168
  
Possible biological names infered from orthology : P24863 / Q62447
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 71627448
Gene end: 71645299
  
Corresponding Affymetrix probe sets: Gga.9076.1.S1_a_at (Chicken Array)   GgaAffx.11563.1.S1_at (Chicken Array)   GgaAffx.11563.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000063220
Ensembl peptide - ENSGALP00000036437
NCBI entrez gene - 421791     See in Manteia.
RefSeq - XM_015284605
RefSeq - NM_001167765
RefSeq - XM_015284604
RefSeq Peptide - NP_001161237
swissprot - P55168
swissprot - A0A1L1RWK6
Ensembl - ENSGALG00000015471
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccncENSDARG00000009607Danio rerio
 CCNCENSG00000112237Homo sapiens
 CcncENSMUSG00000028252Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CCNK / cyclin-K / O75909*ENSGALG0000001113828
CCNL2 / cyclin-L1 / Q96S94* / Q9JJA7* / cyclin L2*ENSGALG0000000155125
CCNL1 / cyclin L1 / Q52KE7* / Q9UK58* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSGALG0000000969925
CCNT2 / cyclin T2 / O60583* / Q7TQK0*ENSGALG0000001220725


Protein motifs (from Interpro)
Interpro ID Name
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like
 IPR031658  Cyclin, C-terminal domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0045859 regulation of protein kinase activity IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 cellular_componentGO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0016592 mediator complex IEA
 molecular_functionGO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000017104 CDK8 / cyclin dependent kinase 8 / P49336* / Q8R3L8*  / complex
 ENSGALG00000036001 SMAD2Z / SMAD2* / Q62432* / Q15796* / SMAD family member 2* / Mothers against decapentaplegic homolog 2 *  / reaction
 ENSGALG00000014184 SMAD2* / Q15796* / Q62432* / SMAD family member 2* / Mothers against decapentaplegic homolog 2 *  / reaction






 

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