ENSDARG00000017525


Danio rerio

Features
Gene ID: ENSDARG00000017525
  
Biological name :ccnt1
  
Synonyms : ccnt1 / cyclin T1
  
Possible biological names infered from orthology : O60563 / Q9QWV9
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 35650771
Gene end: 35664505
  
Corresponding Affymetrix probe sets: Dr.18505.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000027016
swissprot - B8A521
ZFIN ID - ZDB-GENE-030131-6397
Ensembl - ENSDARG00000017525
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCNT1ENSG00000129315Homo sapiens
 Ccnt1ENSMUSG00000011960Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccnt2a / cyclin T2a / CCNT2* / O60583* / Q7TQK0* / cyclin T2*ENSDARG0000003668541
ccnt2b / cyclin T2bENSDARG0000003651041
ccnk / cyclin K / O75909*ENSDARG0000003414616
ccnl1a / cyclin L1a / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000005512415
ccnl1b / cyclin L1b / CCNL1* / Q52KE7* / Q9UK58* / cyclin L1* / Mus musculus cyclin L1 (Ccnl1), transcript variant 2, mRNA.*ENSDARG0000001214014
ccnc / cyclin C / P24863* / Q62447*ENSDARG0000000960710
ccnq / cyclin Q / Fam58b* / Q8QZR8* / Q8N1B3* / family with sequence similarity 58, member B*ENSDARG000000375378


Protein motifs (from Interpro)
Interpro ID Name
 IPR006671  Cyclin, N-terminal
 IPR013763  Cyclin-like
 IPR028863  Cyclin-T1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:1901409 positive regulation of phosphorylation of RNA polymerase II C-terminal domain IBA
 cellular_componentGO:0000307 cyclin-dependent protein kinase holoenzyme complex IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IBA


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Transcription Elongation
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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