ENSDARG00000052082


Danio rerio

Features
Gene ID: ENSDARG00000052082
  
Biological name :gabarapb
  
Synonyms : GABA(A) receptor-associated protein b / gabarapb
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 69470142
Gene end: 69478567
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000068351
Ensembl peptide - ENSDARP00000150525
NCBI entrez gene - 793200     See in Manteia.
RefSeq - XM_003199019
swissprot - F1QY33
ZFIN ID - ZDB-GENE-101102-9
Ensembl - ENSDARG00000052082
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gabarapa / GABA(A) receptor-associated protein a / Q9DCD6* / O95166* / GABARAP* / GABA type A receptor-associated protein* / Gamma-aminobutyric acid receptor-associated protein *ENSDARG0000003555775
zgc:92606 / Q8R3R8* / Q9H0R8* / GABARAPL1* / GABA type A receptor associated protein like 1* / Gamma-aminobutyric acid receptor-associated protein-like 1 *ENSDARG0000004097146
gabarapl2 / GABA(A) receptor-associated protein like 2 / P60520* / P60521* / GABA type A receptor associated protein like 2* / Gamma-aminobutyric acid receptor-associated protein-like 2 *ENSDARG0000002720044
map1lc3c / microtubule-associated protein 1 light chain 3 gamma / Q9BXW4*ENSDARG0000010052829
map1lc3cl / microtubule-associated protein 1 light chain 3 gamma, likeENSDARG0000007572729
map1lc3b / microtubule-associated protein 1 light chain 3 beta / Q9GZQ8* / Q9CQV6* / A6NCE7* / MAP1LC3B2* / Microtubule-associated proteins 1A/1B light chain 3B * / microtubule associated p...ENSDARG0000010112724
map1lc3a / microtubule-associated protein 1 light chain 3 alpha / Q91VR7* / Q9H492* / Microtubule-associated proteins 1A/1B light chain 3A *ENSDARG0000003360924


Protein motifs (from Interpro)
Interpro ID Name
 IPR004241  Autophagy protein Atg8 ubiquitin-like
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0006995 cellular response to nitrogen starvation IBA
 biological_processGO:0060322 head development IMP
 cellular_componentGO:0000421 autophagosome membrane IBA
 cellular_componentGO:0005829 cytosol IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain apoptotic process increased occurrence , abnormal
brain cell proliferation decreased occurrence , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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