ENSDARG00000027200


Danio rerio

Features
Gene ID: ENSDARG00000027200
  
Biological name :gabarapl2
  
Synonyms : GABA(A) receptor-associated protein like 2 / gabarapl2
  
Possible biological names infered from orthology : GABA type A receptor associated protein like 2 / Gamma-aminobutyric acid receptor-associated protein-like 2 / P60520 / P60521
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 34835553
Gene end: 34845302
  
Corresponding Affymetrix probe sets: Dr.16079.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000039056
NCBI entrez gene - 403036     See in Manteia.
swissprot - Q6TH05
ZFIN ID - ZDB-GENE-040718-336
Ensembl - ENSDARG00000027200
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GABARAPL2ENSGALG00000003208Gallus gallus
 P60520ENSG00000034713Homo sapiens
 P60521ENSMUSG00000031950Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gabarapb / GABA(A) receptor-associated protein bENSDARG0000005208257
gabarapa / GABA(A) receptor-associated protein a / Q9DCD6* / O95166* / GABARAP* / GABA type A receptor-associated protein* / Gamma-aminobutyric acid receptor-associated protein *ENSDARG0000003555757
map1lc3c / microtubule-associated protein 1 light chain 3 gamma / Q9BXW4*ENSDARG0000010052841
zgc:92606 / Q8R3R8* / Q9H0R8* / GABARAPL1* / GABA type A receptor associated protein like 1* / Gamma-aminobutyric acid receptor-associated protein-like 1 *ENSDARG0000004097141
map1lc3a / microtubule-associated protein 1 light chain 3 alpha / Q91VR7* / Q9H492* / Microtubule-associated proteins 1A/1B light chain 3A *ENSDARG0000003360938
map1lc3b / microtubule-associated protein 1 light chain 3 beta / Q9GZQ8* / Q9CQV6* / A6NCE7* / MAP1LC3B2* / Microtubule-associated proteins 1A/1B light chain 3B * / microtubule associated p...ENSDARG0000010112738
map1lc3cl / microtubule-associated protein 1 light chain 3 gamma, likeENSDARG0000007572737


Protein motifs (from Interpro)
Interpro ID Name
 IPR004241  Autophagy protein Atg8 ubiquitin-like
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0006995 cellular response to nitrogen starvation IBA
 cellular_componentGO:0000421 autophagosome membrane IBA
 cellular_componentGO:0005829 cytosol IBA


Pathways (from Reactome)
Pathway description
Macroautophagy
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000075333 tbc1d25 / TBC1 domain family, member 25 / A1A5B6* / Q3MII6*  / reaction / complex






 

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