ENSDARG00000055574


Danio rerio

Features
Gene ID: ENSDARG00000055574
  
Biological name :FOXN2 (1 of many)
  
Synonyms : forkhead box N2 / FOXN2 (1 of many)
  
Possible biological names infered from orthology : FOXN2 / Mus musculus forkhead box N2 (Foxn2), transcript variant 3, mRNA. / P32314
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 48482256
Gene end: 48551810
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000053331
swissprot - E7F234
Ensembl - ENSDARG00000055574
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FOXN2ENSGALG00000008942Gallus gallus
 FOXN2ENSG00000170802Homo sapiens
 Foxn2ENSMUSG00000034998Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
foxn2b / forkhead box N2b / FOXN2* / P32314* / forkhead box N2* / Mus musculus forkhead box N2 (Foxn2), transcript variant 3, mRNA.*ENSDARG0000004510565
foxn3 / forkhead box N3 / O00409* / Q499D0* / Forkhead box protein N3 *ENSDARG0000001283341
ches1 / checkpoint suppressor 1ENSDARG0000004355339
si:ch211-145o7.3ENSDARG0000006154829
foxj3 / forkhead box J3 / Q8BUR3* / Q9UPW0* / Forkhead box protein J3 *ENSDARG0000007577423
foxn4 / A2BGM5 / forkhead box N4 / Q96NZ1* / Q8K3Q3* / Forkhead box protein N4 *ENSDARG0000001059122
F1QDF8 / foxj1a / forkhead box J1a / FOXJ1* / Q92949* / forkhead box J1*ENSDARG0000010191922
si:ch211-262e15.1 / FOXK2* / Q01167* / Q3UCQ1* / forkhead box K2* / Forkhead box protein K2 *ENSDARG0000001160922
foxk2 / forkhead box K2 / Q01167*ENSDARG0000003058322
foxk1 / forkhead box K1 / P42128* / P85037* / Forkhead box protein K1 *ENSDARG0000003787221
F1R8Z9 / foxj1b / forkhead box J1bENSDARG0000008829021
foxn1 / forkhead box N1 / O15353* / Q61575* / Forkhead box protein N1 *ENSDARG0000001187920
foxj2 / forkhead box J2 / Q9ES18* / Q9P0K8* / Forkhead box protein J2 *ENSDARG0000005768020


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR018122  Fork head domain conserved site1
 IPR030456  Fork head domain conserved site 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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