ENSDARG00000012833


Danio rerio

Features
Gene ID: ENSDARG00000012833
  
Biological name :foxn3
  
Synonyms : forkhead box N3 / foxn3
  
Possible biological names infered from orthology : Forkhead box protein N3 / O00409 / Q499D0
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 16564921
Gene end: 16734329
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000120674
Ensembl peptide - ENSDARP00000126371
NCBI entrez gene - 692291     See in Manteia.
swissprot - E9QJB6
swissprot - K7DY44
ZFIN ID - ZDB-GENE-060512-39
Ensembl - ENSDARG00000012833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FOXN3ENSGALG00000010665Gallus gallus
 FOXN3ENSG00000053254Homo sapiens
 Foxn3ENSMUSG00000033713Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ches1 / checkpoint suppressor 1ENSDARG0000004355349
foxn2b / forkhead box N2b / FOXN2* / P32314* / forkhead box N2* / Mus musculus forkhead box N2 (Foxn2), transcript variant 3, mRNA.*ENSDARG0000004510534
forkhead box N2 / FOXN2 (1 of many) / FOXN2* / P32314*ENSDARG0000005557428
si:ch211-145o7.3ENSDARG0000006154824
si:ch211-262e15.1 / FOXK2* / Q01167* / Q3UCQ1* / forkhead box K2* / Forkhead box protein K2 *ENSDARG0000001160921
foxk1 / forkhead box K1 / P42128* / P85037* / Forkhead box protein K1 *ENSDARG0000003787221
foxn4 / A2BGM5 / forkhead box N4 / Q96NZ1* / Q8K3Q3* / Forkhead box protein N4 *ENSDARG0000001059120
foxk2 / forkhead box K2 / Q01167*ENSDARG0000003058320
foxj3 / forkhead box J3 / Q8BUR3* / Q9UPW0* / Forkhead box protein J3 *ENSDARG0000007577419
foxj2 / forkhead box J2 / Q9ES18* / Q9P0K8* / Forkhead box protein J2 *ENSDARG0000005768018
F1QDF8 / foxj1a / forkhead box J1a / FOXJ1* / Q92949* / forkhead box J1*ENSDARG0000010191917
foxn1 / forkhead box N1 / O15353* / Q61575* / Forkhead box protein N1 *ENSDARG0000001187917
F1R8Z9 / foxj1b / forkhead box J1bENSDARG0000008829017


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR018122  Fork head domain conserved site1
 IPR030456  Fork head domain conserved site 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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