ENSDARG00000056877


Danio rerio

Features
Gene ID: ENSDARG00000056877
  
Biological name :vamp2
  
Synonyms : vamp2 / vesicle-associated membrane protein 2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 22838364
Gene end: 22845485
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073910
NCBI entrez gene - 336281     See in Manteia.
RefSeq - NM_200005
RefSeq Peptide - NP_956299
swissprot - Q7SZZ5
ZFIN ID - ZDB-GENE-030131-8225
Ensembl - ENSDARG00000056877
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vamp1 / vesicle-associated membrane protein 1 / P23763* / Q62442*ENSDARG0000003128380
zgc:92912 / VAMP1* / P23763* / Q62442* / vesicle associated membrane protein 1*ENSDARG0000009757679
vamp3 / vesicle-associated membrane protein 3 (cellubrevin) / P63024* / Q15836* / vesicle associated membrane protein 3*ENSDARG0000007016169
si:ch73-234b20.5ENSDARG0000008699634
vamp8 / vesicle-associated membrane protein 8 (endobrevin) / Q9BV40* / vesicle associated membrane protein 8*ENSDARG0000002411632
vamp4 / vesicle-associated membrane protein 4 / O70480* / O75379*ENSDARG0000004351030


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR016444  Synaptobrevin/Vesicle-associated membrane protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 cellular_componentGO:0031982 vesicle IDA
 cellular_componentGO:0032154 cleavage furrow IDA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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