ENSDARG00000097576


Danio rerio

Features
Gene ID: ENSDARG00000097576
  
Biological name :zgc:92912
  
Synonyms : zgc:92912
  
Possible biological names infered from orthology : P23763 / Q62442 / VAMP1 / vesicle associated membrane protein 1
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 9779680
Gene end: 9786259
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129602
NCBI entrez gene - 436805     See in Manteia.
RefSeq - NM_001002532
RefSeq Peptide - NP_001002532
swissprot - Q6DGI1
ZFIN ID - ZDB-GENE-040718-265
Ensembl - ENSDARG00000097576
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VAMP1ENSGALG00000022955Gallus gallus
 VAMP1ENSG00000139190Homo sapiens
 Vamp1ENSMUSG00000030337Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vamp1 / vesicle-associated membrane protein 1 / P23763* / Q62442*ENSDARG0000003128379
vamp2 / vesicle-associated membrane protein 2ENSDARG0000005687774
vamp3 / vesicle-associated membrane protein 3 (cellubrevin) / P63024* / Q15836* / vesicle associated membrane protein 3*ENSDARG0000007016160
si:ch73-234b20.5ENSDARG0000008699630
vamp4 / vesicle-associated membrane protein 4 / O70480* / O75379*ENSDARG0000004351027
vamp8 / vesicle-associated membrane protein 8 (endobrevin) / Q9BV40* / vesicle associated membrane protein 8*ENSDARG0000002411626


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR016444  Synaptobrevin/Vesicle-associated membrane protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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