ENSDARG00000031283


Danio rerio

Features
Gene ID: ENSDARG00000031283
  
Biological name :vamp1
  
Synonyms : vamp1 / vesicle-associated membrane protein 1
  
Possible biological names infered from orthology : P23763 / Q62442
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 9460432
Gene end: 9472935
  
Corresponding Affymetrix probe sets: Dr.25500.1.S1_at (Zebrafish Array)   Dr.7095.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000045564
Ensembl peptide - ENSDARP00000117256
NCBI entrez gene - 406707     See in Manteia.
RefSeq - XM_005159424
RefSeq Peptide - NP_998563
swissprot - Q6PBJ3
ZFIN ID - ZDB-GENE-040426-2725
Ensembl - ENSDARG00000031283
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VAMP1ENSGALG00000022955Gallus gallus
 VAMP1ENSG00000139190Homo sapiens
 Vamp1ENSMUSG00000030337Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:92912 / VAMP1* / P23763* / Q62442* / vesicle associated membrane protein 1*ENSDARG0000009757678
vamp2 / vesicle-associated membrane protein 2ENSDARG0000005687774
vamp3 / vesicle-associated membrane protein 3 (cellubrevin) / P63024* / Q15836* / vesicle associated membrane protein 3*ENSDARG0000007016159
vamp4 / vesicle-associated membrane protein 4 / O70480* / O75379*ENSDARG0000004351029
si:ch73-234b20.5ENSDARG0000008699627
vamp8 / vesicle-associated membrane protein 8 (endobrevin) / Q9BV40* / vesicle associated membrane protein 8*ENSDARG0000002411626


Protein motifs (from Interpro)
Interpro ID Name
 IPR001388  Synaptobrevin
 IPR016444  Synaptobrevin/Vesicle-associated membrane protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006887 exocytosis IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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