ENSDARG00000057113


Danio rerio

Features
Gene ID: ENSDARG00000057113
  
Biological name :c6
  
Synonyms : c6 / complement component 6
  
Possible biological names infered from orthology : complement C6 / P13671
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 20914888
Gene end: 20932603
  
Corresponding Affymetrix probe sets: Dr.16392.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000074161
Ensembl peptide - ENSDARP00000140200
Ensembl peptide - ENSDARP00000121497
NCBI entrez gene - 393611     See in Manteia.
RefSeq - NM_200638
RefSeq - XM_005161158
RefSeq Peptide - NP_956932
swissprot - E9QB99
swissprot - Q6PFT2
swissprot - A0A0R4IXC5
ZFIN ID - ZDB-GENE-040426-1358
Ensembl - ENSDARG00000057113
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C6ENSGALG00000014840Gallus gallus
 C6ENSG00000039537Homo sapiens
 C6ENSMUSG00000022181Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
c6 / complement component 6 / P13671* / complement C6*ENSDARG0000009305288
c7a / complement component 7a / C7* / P10643* / complement C7* / complement component 7*ENSDARG0000004217225
c7b / complement component 7b / C7* / P10643* / complement C7* / complement component 7*ENSDARG0000005712124
c8a / complement component 8, alpha polypeptide / P07357* / complement C8 alpha chain*ENSDARG0000003951617
c8b / complement component 8, beta polypeptide / P07358* / complement C8 beta chain*ENSDARG0000003951717
c9 / complement component 9 / P02748* / complement C9*ENSDARG0000001631915


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001862  Membrane attack complex component/perforin/complement C9
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR003884  Factor I / membrane attack complex
 IPR020863  Membrane attack complex component/perforin domain, conserved site
 IPR020864  Membrane attack complex component/perforin (MACPF) domain
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IEA
 biological_processGO:0006956 complement activation IEA
 cellular_componentGO:0005579 membrane attack complex IEA


Pathways (from Reactome)
Pathway description
Terminal pathway of complement
Regulation of Complement cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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