ENSDARG00000016319


Danio rerio

Features
Gene ID: ENSDARG00000016319
  
Biological name :c9
  
Synonyms : c9 / complement component 9
  
Possible biological names infered from orthology : complement C9 / P02748
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 32345187
Gene end: 32355289
  
Corresponding Affymetrix probe sets: Dr.2452.1.A1_at (Zebrafish Array)   Dr.2452.2.A1_a_at (Zebrafish Array)   Dr.2452.2.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121323
NCBI entrez gene - 554141     See in Manteia.
RefSeq - NM_001327926
RefSeq Peptide - NP_001314855
swissprot - B8A565
ZFIN ID - ZDB-GENE-050522-442
Ensembl - ENSDARG00000016319
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 C9ENSG00000113600Homo sapiens
 C9ENSMUSG00000022149Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
c8b / complement component 8, beta polypeptide / P07358* / complement C8 beta chain*ENSDARG0000003951723
c8a / complement component 8, alpha polypeptide / P07357* / complement C8 alpha chain*ENSDARG0000003951623
c7b / complement component 7b / C7* / P10643* / complement C7* / complement component 7*ENSDARG0000005712122
c6 / complement component 6 / P13671* / complement C6*ENSDARG0000009305220
c6 / complement component 6 / P13671* / complement C6*ENSDARG0000005711320
c7a / complement component 7a / C7* / P10643* / complement C7* / complement component 7*ENSDARG0000004217219


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001862  Membrane attack complex component/perforin/complement C9
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR016186  C-type lectin-like/link domain superfamily
 IPR020863  Membrane attack complex component/perforin domain, conserved site
 IPR020864  Membrane attack complex component/perforin (MACPF) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IEA
 biological_processGO:0071391 cellular response to estrogen stimulus IDA
 cellular_componentGO:0005579 membrane attack complex IEA


Pathways (from Reactome)
Pathway description
Terminal pathway of complement
Regulation of Complement cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000053831 vtnb / vitronectin b / VTN* / P04004* / P29788* / AC002094.3* / vitronectin*  / complex / reaction
 ENSDARG00000032098 c8g / complement component 8, gamma polypeptide / Q8VCG4* / P07360* / complement C8 gamma chain* / Complement component C8 gamma chain *  / complex / reaction
 ENSDARG00000039517 c8b / complement component 8, beta polypeptide / P07358* / complement C8 beta chain*  / complex / reaction
 ENSDARG00000021004 c5 / complement component 5 / P01031* / complement C5*  / complex / reaction
 ENSDARG00000039516 c8a / complement component 8, alpha polypeptide / P07357* / complement C8 alpha chain*  / complex / reaction
 ENSDARG00000057121 c7b / complement component 7b / C7* / P10643* / complement C7* / complement component 7*  / reaction / complex
 ENSDARG00000016319 c9 / complement component 9 / P02748* / complement C9*  / reaction






 

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