ENSDARG00000058089


Danio rerio

Features
Gene ID: ENSDARG00000058089
  
Biological name :rprd2a
  
Synonyms : regulation of nuclear pre-mRNA domain containing 2a / rprd2a
  
Possible biological names infered from orthology : Q5VT52 / Q6NXI6 / regulation of nuclear pre-mRNA domain containing 2 / RPRD2
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 8893952
Gene end: 8926575
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000075341
NCBI entrez gene - 334701     See in Manteia.
RefSeq - NM_199922
RefSeq Peptide - NP_956216
swissprot - Q1LXW2
ZFIN ID - ZDB-GENE-030131-6641
Ensembl - ENSDARG00000058089
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPRD2ENSGALG00000014656Gallus gallus
 RPRD2ENSG00000163125Homo sapiens
 Rprd2ENSMUSG00000028106Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rprd2b / regulation of nuclear pre-mRNA domain containing 2b / RPRD2* / Q5VT52* / regulation of nuclear pre-mRNA domain containing 2*ENSDARG0000007467629
rprd1b / regulation of nuclear pre-mRNA domain containing 1B / Q9CSU0* / Q9NQG5* / Regulation of nuclear pre-mRNA domain-containing protein 1B *ENSDARG000000381137
rprd1a / regulation of nuclear pre-mRNA domain containing 1A / Q8VDS4* / Q96P16* / Regulation of nuclear pre-mRNA domain-containing protein 1A *ENSDARG000001048617


Protein motifs (from Interpro)
Interpro ID Name
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS
 IPR032337  Cell-cycle alteration and expression-elevated protein in tumour


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr