ENSDARG00000074676


Danio rerio

Features
Gene ID: ENSDARG00000074676
  
Biological name :rprd2b
  
Synonyms : regulation of nuclear pre-mRNA domain containing 2b / rprd2b
  
Possible biological names infered from orthology : Q5VT52 / Q6NXI6 / regulation of nuclear pre-mRNA domain containing 2 / RPRD2
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 1199202
Gene end: 1211162
  
Corresponding Affymetrix probe sets: Dr.13724.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000102111
NCBI entrez gene - 556426     See in Manteia.
swissprot - F1Q4R4
ZFIN ID - ZDB-GENE-110719-1
Ensembl - ENSDARG00000074676
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPRD2ENSGALG00000014656Gallus gallus
 RPRD2ENSG00000163125Homo sapiens
 Rprd2ENSMUSG00000028106Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rprd2a / regulation of nuclear pre-mRNA domain containing 2a / RPRD2* / Q5VT52* / Q6NXI6* / regulation of nuclear pre-mRNA domain containing 2*ENSDARG0000005808929
rprd1b / regulation of nuclear pre-mRNA domain containing 1B / Q9CSU0* / Q9NQG5* / Regulation of nuclear pre-mRNA domain-containing protein 1B *ENSDARG000000381136
rprd1a / regulation of nuclear pre-mRNA domain containing 1A / Q8VDS4* / Q96P16* / Regulation of nuclear pre-mRNA domain-containing protein 1A *ENSDARG000001048616


Protein motifs (from Interpro)
Interpro ID Name
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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