ENSDARG00000104861


Danio rerio

Features
Gene ID: ENSDARG00000104861
  
Biological name :rprd1a
  
Synonyms : regulation of nuclear pre-mRNA domain containing 1A / rprd1a
  
Possible biological names infered from orthology : Q8VDS4 / Q96P16 / Regulation of nuclear pre-mRNA domain-containing protein 1A
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 46309553
Gene end: 46333810
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133723
swissprot - E7F882
ZFIN ID - ZDB-GENE-141211-20
Ensembl - ENSDARG00000104861
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPRD1AENSGALG00000013129Gallus gallus
 Q96P16ENSG00000141425Homo sapiens
 Q8VDS4ENSMUSG00000040446Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rprd1b / regulation of nuclear pre-mRNA domain containing 1B / Q9CSU0* / Q9NQG5* / Regulation of nuclear pre-mRNA domain-containing protein 1B *ENSDARG0000003811360
rprd2a / regulation of nuclear pre-mRNA domain containing 2a / RPRD2* / Q5VT52* / Q6NXI6* / regulation of nuclear pre-mRNA domain containing 2*ENSDARG0000005808925
rprd2b / regulation of nuclear pre-mRNA domain containing 2b / RPRD2* / Q5VT52* / regulation of nuclear pre-mRNA domain containing 2*ENSDARG0000007467620


Protein motifs (from Interpro)
Interpro ID Name
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS
 IPR032337  Cell-cycle alteration and expression-elevated protein in tumour


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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