ENSGALG00000014656


Gallus gallus

Features
Gene ID: ENSGALG00000014656
  
Biological name :RPRD2
  
Synonyms : regulation of nuclear pre-mRNA domain containing 2 / RPRD2
  
Possible biological names infered from orthology : Q5VT52 / Q6NXI6
  
Species: Gallus gallus
  
Chr. number: 25
Strand: -1
Band:
Gene start: 2348799
Gene end: 2367573
  
Corresponding Affymetrix probe sets: Gga.10400.1.S1_s_at (Chicken Array)   Gga.3810.1.S1_s_at (Chicken Array)   GgaAffx.12709.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056844
Ensembl peptide - ENSGALP00000064443
Ensembl peptide - ENSGALP00000023574
Ensembl peptide - ENSGALP00000048519
NCBI entrez gene - 425074     See in Manteia.
RefSeq - XM_015298623
RefSeq - XM_015298617
RefSeq - XM_015298619
RefSeq - XM_015298620
RefSeq - XM_015298621
RefSeq - XM_015298622
RefSeq - NM_001012932
RefSeq Peptide - NP_001012950
swissprot - A0A1D5PV83
swissprot - H9L0N7
swissprot - A0A1D5P736
swissprot - Q5ZJ28
Ensembl - ENSGALG00000014656
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rprd2aENSDARG00000058089Danio rerio
 rprd2bENSDARG00000074676Danio rerio
 RPRD2ENSG00000163125Homo sapiens
 Rprd2ENSMUSG00000028106Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RPRD1B / regulation of nuclear pre-mRNA domain containing 1B / Q9CSU0* / Q9NQG5* / Regulation of nuclear pre-mRNA domain-containing protein 1B *ENSGALG000000067886
RPRD1A / regulation of nuclear pre-mRNA domain-containing protein 1A / Q8VDS4* / Q96P16* / regulation of nuclear pre-mRNA domain containing 1A*ENSGALG000000131296


Protein motifs (from Interpro)
Interpro ID Name
 IPR006569  CID domain
 IPR006903  RNA polymerase II-binding domain
 IPR008942  ENTH/VHS
 IPR032337  Cell-cycle alteration and expression-elevated protein in tumour


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016591 DNA-directed RNA polymerase II, holoenzyme IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000006788 RPRD1B / regulation of nuclear pre-mRNA domain containing 1B / Q9CSU0* / Q9NQG5* / Regulation of nuclear pre-mRNA domain-containing protein 1B *  / reaction / complex
 ENSGALG00000013129 RPRD1A / regulation of nuclear pre-mRNA domain-containing protein 1A / Q8VDS4* / Q96P16* / regulation of nuclear pre-mRNA domain containing 1A*  / complex / reaction






 

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