ENSDARG00000059460


Danio rerio

Features
Gene ID: ENSDARG00000059460
  
Biological name :sbf2
  
Synonyms : sbf2 / SET binding factor 2
  
Possible biological names infered from orthology : Q86WG5
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 66884291
Gene end: 67171468
  
Corresponding Affymetrix probe sets: Dr.15780.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000077099
Ensembl peptide - ENSDARP00000145663
NCBI entrez gene - 378456     See in Manteia.
RefSeq - XM_009303601
swissprot - E7F4G2
ZFIN ID - ZDB-GENE-030911-10
Ensembl - ENSDARG00000059460
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SBF2ENSGALG00000005716Gallus gallus
 SBF2ENSG00000133812Homo sapiens
 Sbf2ENSMUSG00000038371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sbf1 / SET binding factor 1 / O95248* / Q6ZPE2*ENSDARG0000006296857
mtm1 / myotubularin 1 / Q13496*ENSDARG000000375609
mtmr1b / myotubularin related protein 1b / MTMR1* / Q9Z2C4* / Q13613* / myotubularin related protein 1*ENSDARG000000223789
mtmr1a / myotubularin related protein 1a / MTMR1* / Q9Z2C4* / Q13613* / myotubularin related protein 1*ENSDARG000000566909
mtmr2 / A0JMK5 / myotubularin related protein 2 / Q13614* / Q9Z2D1*ENSDARG000000046169
mtmr7b / myotubularin related protein 7b / MTMR7* / Q9Z2C9* / Q9Y216* / myotubularin related protein 7*ENSDARG000000704128
mtmr9 / myotubularin related protein 9 / Q96QG7* / Q9Z2D0*ENSDARG000000158608
mtmr7a / myotubularin related protein 7a / MTMR7* / Q9Z2C9* / Q9Y216* / myotubularin related protein 7*ENSDARG000000371018
mtmr6 / myotubularin related protein 6 / Q8VE11* / Q9Y217*ENSDARG000000167948
mtmr8 / Q6TEL0 / myotubularin related protein 8 / Q96EF0*ENSDARG000000085927
zgc:154055ENSDARG000001039247
mtmr3 / myotubularin related protein 3 / Q13615*ENSDARG000000933645
mtmr3 / myotubularin related protein 3 / Q13615*ENSDARG000000982014


Protein motifs (from Interpro)
Interpro ID Name
 IPR001194  cDENN domain
 IPR001849  Pleckstrin homology domain
 IPR004182  GRAM domain
 IPR005112  dDENN domain
 IPR005113  uDENN domain
 IPR010569  Myotubularin-like phosphatase domain
 IPR011993  PH-like domain superfamily
 IPR022096  SBF1/SBF2 domain
 IPR029021  Protein-tyrosine phosphatase-like
 IPR030564  Myotubularin family
 IPR030567  Myotubularin-related protein 13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043087 regulation of GTPase activity IEA
 molecular_functionGO:0019208 phosphatase regulator activity IEA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000100752 RAB21 / zgc:154045 / P35282* / Q9UL25* / RAB21, member RAS oncogene family*  / reaction
 ENSDARG00000056122 gdi1 / GDP dissociation inhibitor 1 / P31150* / P50396* / Rab GDP dissociation inhibitor alpha *  / reaction






 

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