ENSGALG00000005716


Gallus gallus

Features
Gene ID: ENSGALG00000005716
  
Biological name :SBF2
  
Synonyms : SBF2 / SET binding factor 2
  
Possible biological names infered from orthology : Q86WG5
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 8990150
Gene end: 9220219
  
Corresponding Affymetrix probe sets: Gga.17512.1.S1_at (Chicken Array)   Gga.18065.1.S1_s_at (Chicken Array)   GgaAffx.3576.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009156
Ensembl peptide - ENSGALP00000057421
Ensembl peptide - ENSGALP00000056747
Ensembl peptide - ENSGALP00000055028
NCBI entrez gene - 423043     See in Manteia.
RefSeq - XM_015286380
RefSeq - XM_015286384
RefSeq - XM_015286383
RefSeq - XM_015286382
RefSeq - NM_001012895
RefSeq - XM_015286381
RefSeq Peptide - NP_001012913
swissprot - E1C7M2
swissprot - A0A1D5PQ67
swissprot - A0A1D5PUY9
swissprot - A0A1D5PWT3
Ensembl - ENSGALG00000005716
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sbf2ENSDARG00000059460Danio rerio
 SBF2ENSG00000133812Homo sapiens
 Sbf2ENSMUSG00000038371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SBF1 / SET binding factor 1 / O95248* / Q6ZPE2*ENSGALG0000004317861
MTMR3 / myotubularin related protein 3 / Q13615*ENSGALG0000000805110
MTMR4 / myotubularin related protein 4 / Q91XS1* / Q9NYA4* / Mus musculus myotubularin related protein 4 (Mtmr4), transcript variant 2, mRNA.*ENSGALG0000000104210
MTMR1 / myotubularin related protein 1 / Q13613* / Q9Z2C4*ENSGALG000000090859
MTMR2 / Q5ZIV1 / Myotubularin-related protein 2 / Q13614* / Q9Z2D1*ENSGALG000000172009
MTMR8 / myotubularin-related protein 8 / Q96EF0*ENSGALG000000075908
MTMR6 / myotubularin related protein 6 / Q8VE11* / Q9Y217*ENSGALG000000171128
MTMR9 / myotubularin-related protein 9 / Q96QG7* / Q9Z2D0*ENSGALG000000166497
ENSGALG000000033137
MTMR7* / Q9Y216* / Q9Z2C9* / myotubularin related protein 7*ENSGALG000000136415
MTM1 / myotubularin 1 / Q13496* / Q9Z2C5* / X-linked myotubular myopathy gene 1*ENSGALG000000090964
MTMR7* / Q9Y216* / Q9Z2C9* / myotubularin related protein 7*ENSGALG000000360213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001194  cDENN domain
 IPR001849  Pleckstrin homology domain
 IPR004182  GRAM domain
 IPR005112  dDENN domain
 IPR005113  uDENN domain
 IPR010569  Myotubularin-like phosphatase domain
 IPR011993  PH-like domain superfamily
 IPR022096  SBF1/SBF2 domain
 IPR029021  Protein-tyrosine phosphatase-like
 IPR030564  Myotubularin family
 IPR030567  Myotubularin-related protein 13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043087 regulation of GTPase activity IEA
 biological_processGO:0051262 protein tetramerization IEA
 cellular_componentGO:0005774 vacuolar membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0019208 phosphatase regulator activity IEA
 molecular_functionGO:0019902 phosphatase binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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