ENSDARG00000100752


Danio rerio

Features
Gene ID: ENSDARG00000100752
  
Biological name :RAB21
  
Synonyms : RAB21 / zgc:154045
  
Possible biological names infered from orthology : P35282 / Q9UL25 / RAB21, member RAS oncogene family
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 74087575
Gene end: 74109792
  
Corresponding Affymetrix probe sets: Dr.4889.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000143126
NCBI entrez gene - 767727     See in Manteia.
swissprot - Q08BX0
ZFIN ID - ZDB-GENE-060929-1062
Ensembl - ENSDARG00000100752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAB21ENSGALG00000010183Gallus gallus
 RAB21ENSG00000080371Homo sapiens
 Rab21ENSMUSG00000020132Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rab5c / RAB5C, member RAS oncogene family / P35278* / P51148*ENSDARG0000002671240
rab5b / RAB5B, member RAS oncogene familyENSDARG0000001605939
rab5ab / RAB5A, member RAS oncogene family, b / Rab5a* / Q9CQD1* / AC099811.2* / Ras-related protein Rab-5A *ENSDARG0000000725739
rab5aa / RAB5A, member RAS oncogene family, a / Rab5a* / Q9CQD1* / AC099811.2* / Ras-related protein Rab-5A *ENSDARG0000001860239
LO018490.1 / RAB31* / Q13636* / RAB31, member RAS oncogene family*ENSDARG0000011583238
rab22a / RAB22A, member RAS oncogene family / P35285* / Q9UL26*ENSDARG0000001580738
rab20 / RAB20, member RAS oncogene family / P35295* / Q9NX57* / Ras-related protein Rab-20 *ENSDARG0000000504930
Q6IMK3 / dnajc27 / DnaJ (Hsp40) homolog, subfamily C, member 27 / Q8CFP6* / Q9NZQ0* / DnaJ homolog subfamily C member 27 * / DnaJ heat shock protein family (Hsp40) member C27*ENSDARG0000007091629


Protein motifs (from Interpro)
Interpro ID Name
 IPR001806  Small GTPase superfamily
 IPR005225  Small GTP-binding protein domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000062968 sbf1 / SET binding factor 1 / O95248* / Q6ZPE2*  / reaction
 ENSDARG00000059460 sbf2 / SET binding factor 2 / Q86WG5*  / reaction
 ENSDARG00000056122 gdi1 / GDP dissociation inhibitor 1 / P31150* / P50396* / Rab GDP dissociation inhibitor alpha *  / complex






 

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