ENSDARG00000060345


Danio rerio

Features
Gene ID: ENSDARG00000060345
  
Biological name :apoda.1
  
Synonyms : apoda.1 / apolipoprotein Da, duplicate 1
  
Possible biological names infered from orthology : APOD / apolipoprotein D / P05090 / P51910
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 37207799
Gene end: 37210397
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000079373
NCBI entrez gene - 767642     See in Manteia.
RefSeq - NM_001076582
RefSeq Peptide - NP_001070050
swissprot - F1R0I2
ZFIN ID - ZDB-GENE-060929-148
Ensembl - ENSDARG00000060345
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 APODENSGALG00000006995Gallus gallus
 APODENSG00000189058Homo sapiens
 ApodENSMUSG00000022548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
apodb / apolipoprotein Db / APOD* / P05090* / P51910* / apolipoprotein D*ENSDARG0000005743756
apoda.2 / apolipoprotein Da, duplicate 2 / APOD* / P05090* / P51910* / apolipoprotein D*ENSDARG0000006035038


Protein motifs (from Interpro)
Interpro ID Name
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR002969  Apolipoprotein D
 IPR012674  Calycin
 IPR022271  Lipocalin, ApoD type
 IPR022272  Lipocalin family conserved site
 IPR026222  Apolipoprotein D, vertebrates


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0007568 aging IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr