ENSGALG00000006995


Gallus gallus

Features
Gene ID: ENSGALG00000006995
  
Biological name :APOD
  
Synonyms : APOD / apolipoprotein D
  
Possible biological names infered from orthology : P05090 / P51910
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 12704199
Gene end: 12707547
  
Corresponding Affymetrix probe sets: Gga.5318.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011312
NCBI entrez gene - 424893     See in Manteia.
RefSeq - NM_001011692
RefSeq Peptide - NP_001011692
swissprot - Q5G8Y9
Ensembl - ENSGALG00000006995
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 apoda.1ENSDARG00000060345Danio rerio
 apoda.2ENSDARG00000060350Danio rerio
 apodbENSDARG00000057437Danio rerio
 APODENSG00000189058Homo sapiens
 ApodENSMUSG00000022548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR002345  Lipocalin
 IPR002969  Apolipoprotein D
 IPR012674  Calycin
 IPR022271  Lipocalin, ApoD type
 IPR022272  Lipocalin family conserved site
 IPR026222  Apolipoprotein D, vertebrates


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000302 response to reactive oxygen species IEA
 biological_processGO:0006006 glucose metabolic process IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0007568 aging IEA
 biological_processGO:0010642 negative regulation of platelet-derived growth factor receptor signaling pathway IEA
 biological_processGO:0042308 negative regulation of protein import into nucleus IEA
 biological_processGO:0048662 negative regulation of smooth muscle cell proliferation IEA
 biological_processGO:0051895 negative regulation of focal adhesion assembly IEA
 biological_processGO:0060588 negative regulation of lipoprotein lipid oxidation IEA
 biological_processGO:0071638 negative regulation of monocyte chemotactic protein-1 production IEA
 biological_processGO:1900016 negative regulation of cytokine production involved in inflammatory response IEA
 biological_processGO:2000098 negative regulation of smooth muscle cell-matrix adhesion IEA
 biological_processGO:2000405 negative regulation of T cell migration IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0015485 cholesterol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr