ENSDARG00000060350


Danio rerio

Features
Gene ID: ENSDARG00000060350
  
Biological name :apoda.2
  
Synonyms : apoda.2 / apolipoprotein Da, duplicate 2
  
Possible biological names infered from orthology : APOD / apolipoprotein D / P05090 / P51910
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 37207461
Gene end: 37215989
  
Corresponding Affymetrix probe sets: Dr.16052.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123418
Ensembl peptide - ENSDARP00000113343
Ensembl peptide - ENSDARP00000117077
Ensembl peptide - ENSDARP00000123122
NCBI entrez gene - 100148022     See in Manteia.
RefSeq - NM_001201349
RefSeq - NM_001201348
RefSeq - NM_001201351
RefSeq Peptide - NP_001188277
RefSeq Peptide - NP_001188278
RefSeq Peptide - NP_001188279
RefSeq Peptide - NP_001188280
swissprot - E7F2R8
ZFIN ID - ZDB-GENE-070912-551
Ensembl - ENSDARG00000060350
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 APODENSGALG00000006995Gallus gallus
 APODENSG00000189058Homo sapiens
 ApodENSMUSG00000022548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
apodb / apolipoprotein Db / APOD* / P05090* / P51910* / apolipoprotein D*ENSDARG0000005743742
apoda.1 / apolipoprotein Da, duplicate 1 / APOD* / P05090* / P51910* / apolipoprotein D*ENSDARG0000006034538


Protein motifs (from Interpro)
Interpro ID Name
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR002345  Lipocalin
 IPR002969  Apolipoprotein D
 IPR012674  Calycin
 IPR022271  Lipocalin, ApoD type
 IPR022272  Lipocalin family conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0007568 aging IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr