ENSDARG00000061168


Danio rerio

Features
Gene ID: ENSDARG00000061168
  
Biological name :dhx34
  
Synonyms : DEAH (Asp-Glu-Ala-His) box polypeptide 34 / dhx34
  
Possible biological names infered from orthology : DExH-box helicase 34 / Q14147
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 44566863
Gene end: 44590092
  
Corresponding Affymetrix probe sets: Dr.23984.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000081377
Ensembl peptide - ENSDARP00000143955
NCBI entrez gene - 555838     See in Manteia.
RefSeq - NM_001128333
RefSeq - XM_017351927
RefSeq Peptide - NP_001121805
swissprot - A2BIE5
swissprot - A0A286YAG0
ZFIN ID - ZDB-GENE-061207-30
Ensembl - ENSDARG00000061168
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DHX34ENSG00000134815Homo sapiens
 Dhx34ENSMUSG00000006019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dhx8 / DEAH (Asp-Glu-Ala-His) box polypeptide 8 / Q14562* / A2A4P0* / DEAH-box helicase 8* / ATP-dependent RNA helicase DHX8 *ENSDARG0000005470722
dhx33 / DEAH (Asp-Glu-Ala-His) box polypeptide 33 / Q80VY9* / Q9H6R0* / DEAH-box helicase 33* / Putative ATP-dependent RNA helicase DHX33 *ENSDARG0000005178521
dhx16 / DEAH (Asp-Glu-Ala-His) box polypeptide 16 / O60231* / DEAH-box helicase 16*ENSDARG0000001315021
dhx38 / DEAH (Asp-Glu-Ala-His) box polypeptide 38 / Q92620* / DEAH-box helicase 38*ENSDARG0000010001321
dhx15 / DEAH (Asp-Glu-Ala-His) box helicase 15 / O35286* / O43143* / DEAH-box helicase 15* / Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 *ENSDARG0000001539220
dhx40 / DEAH (Asp-Glu-Ala-His) box polypeptide 40 / Q6PE54* / Q8IX18* / DEAH-box helicase 40* / Probable ATP-dependent RNA helicase DHX40 *ENSDARG0000004158619
DHX35 / zgc:158828 / Q9H5Z1* / DEAH-box helicase 35* / probable ATP-dependent RNA helicase DHX35 isoform b *ENSDARG0000006341912


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR007502  Helicase-associated domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IMP
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IMP
 biological_processGO:0006396 RNA processing IBA
 biological_processGO:0043009 chordate embryonic development IMP
 biological_processGO:2000623 negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IMP
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000155 somite somite malformed , abnormal
Show

 ZFA:0001094 whole organism whole organism anterior-posterior axis decreased length , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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