ENSDARG00000051785


Danio rerio

Features
Gene ID: ENSDARG00000051785
  
Biological name :dhx33
  
Synonyms : DEAH (Asp-Glu-Ala-His) box polypeptide 33 / dhx33
  
Possible biological names infered from orthology : DEAH-box helicase 33 / Putative ATP-dependent RNA helicase DHX33 / Q80VY9 / Q9H6R0
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 1965296
Gene end: 1991634
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128735
NCBI entrez gene - 796505     See in Manteia.
swissprot - X1WET4
ZFIN ID - ZDB-GENE-131127-77
Ensembl - ENSDARG00000051785
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DHX33ENSGALG00000001630Gallus gallus
 DHX33ENSG00000005100Homo sapiens
 Dhx33ENSMUSG00000040620Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dhx8 / DEAH (Asp-Glu-Ala-His) box polypeptide 8 / Q14562* / A2A4P0* / DEAH-box helicase 8* / ATP-dependent RNA helicase DHX8 *ENSDARG0000005470745
dhx15 / DEAH (Asp-Glu-Ala-His) box helicase 15 / O35286* / O43143* / DEAH-box helicase 15* / Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 *ENSDARG0000001539243
dhx16 / DEAH (Asp-Glu-Ala-His) box polypeptide 16 / O60231* / DEAH-box helicase 16*ENSDARG0000001315043
dhx38 / DEAH (Asp-Glu-Ala-His) box polypeptide 38 / Q92620* / DEAH-box helicase 38*ENSDARG0000010001341
dhx40 / DEAH (Asp-Glu-Ala-His) box polypeptide 40 / Q6PE54* / Q8IX18* / DEAH-box helicase 40* / Probable ATP-dependent RNA helicase DHX40 *ENSDARG0000004158636
dhx34 / DEAH (Asp-Glu-Ala-His) box polypeptide 34 / Q14147* / DExH-box helicase 34*ENSDARG0000006116835
DHX35 / zgc:158828 / Q9H5Z1* / DEAH-box helicase 35* / probable ATP-dependent RNA helicase DHX35 isoform b *ENSDARG0000006341929


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR007502  Helicase-associated domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006356 regulation of transcription by RNA polymerase I IMP
 biological_processGO:0006396 RNA processing IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000114 heart heart edematous , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased life span , abnormal
whole organism decreased amount , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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