ENSDARG00000061187


Danio rerio

Features
Gene ID: ENSDARG00000061187
  
Biological name :cbx5
  
Synonyms : cbx5 / chromobox homolog 5 (HP1 alpha homolog, Drosophila)
  
Possible biological names infered from orthology : chromobox 5 / Mus musculus chromobox 5 (Cbx5), transcript variant 4, mRNA. / P45973 / Q61686
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 36297221
Gene end: 36306356
  
Corresponding Affymetrix probe sets: Dr.9746.5.A1_at (Zebrafish Array)   Dr.9746.5.A2_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115557
Ensembl peptide - ENSDARP00000145931
Ensembl peptide - ENSDARP00000122819
Ensembl peptide - ENSDARP00000120917
Ensembl peptide - ENSDARP00000120906
Ensembl peptide - ENSDARP00000117533
Ensembl peptide - ENSDARP00000081419
Ensembl peptide - ENSDARP00000114145
NCBI entrez gene - 563396     See in Manteia.
swissprot - E9QIB1
swissprot - E9QFQ7
swissprot - E9QD40
swissprot - E9QC43
swissprot - A1L223
ZFIN ID - ZDB-GENE-030131-5553
Ensembl - ENSDARG00000061187
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CBX5ENSGALG00000036856Gallus gallus
 CBX5ENSG00000094916Homo sapiens
 Cbx5ENSMUSG00000009575Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cbx1a / chromobox homolog 1a (HP1 beta homolog Drosophila) / CBX1* / P83917* / P83916* / chromobox 1* / Chromobox protein homolog 1 *ENSDARG0000000418954
cbx3a / chromobox homolog 3a (HP1 gamma homolog, Drosophila) / CBX3* / Q13185* / chromobox 3*ENSDARG0000000386052
cbx1b / chromobox homolog 1b (HP1 beta homolog Drosophila) / CBX1* / P83917* / P83916* / chromobox 1* / Chromobox protein homolog 1 *ENSDARG0000005444250
cbx3b / chromobox homolog 3b / CBX3* / Q13185* / chromobox 3* / chromobox protein homolog 3 *ENSDARG0000009215837


Protein motifs (from Interpro)
Interpro ID Name
 IPR000953  Chromo/chromo shadow domain
 IPR008251  Chromo shadow domain
 IPR016197  Chromo-like domain superfamily
 IPR017984  Chromo domain subgroup
 IPR023779  Chromo domain, conserved site
 IPR023780  Chromo domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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