ENSDARG00000069245


Danio rerio

Features
Gene ID: ENSDARG00000069245
  
Biological name :matn3a
  
Synonyms : matn3a / matrilin 3a
  
Possible biological names infered from orthology : MATN3 / matrilin 3 / O15232 / O35701
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 43760059
Gene end: 43775544
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091381
Ensembl peptide - ENSDARP00000091383
Ensembl peptide - ENSDARP00000124655
Ensembl peptide - ENSDARP00000125091
Ensembl peptide - ENSDARP00000127244
NCBI entrez gene - 445503     See in Manteia.
RefSeq - NM_001004007
RefSeq - NM_001328273
RefSeq - XM_017352468
RefSeq Peptide - NP_001315202
RefSeq Peptide - NP_001004007
swissprot - Q68EK6
swissprot - F1QH94
swissprot - U3JAH6
swissprot - F1QH95
ZFIN ID - ZDB-GENE-040822-21
Ensembl - ENSDARG00000069245
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MATN3ENSGALG00000016478Gallus gallus
 MATN3ENSG00000132031Homo sapiens
 Matn3ENSMUSG00000020583Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
matn3b / matrilin 3b / MATN3* / O35701* / O15232* / matrilin 3*ENSDARG0000006926562
matn4 / matrilin 4 / Q8VCP9* / O95460* / Q86T13* / CLEC14A* / C-type lectin domain containing 14A* / C-type lectin domain family 14 member A *ENSDARG0000001594745
matn1 / matrilin 1 / P21941* / P51942* / Cartilage matrix protein * / matrilin 1, cartilage matrix protein*ENSDARG0000003021541
vwa1 / von Willebrand factor A domain containing 1 / Q6PCB0* / Q8R2Z5*ENSDARG0000007546818
cd248b / CD248 molecule, endosialin b / CD248* / Q9HCU0* / Q91V98* / Endosialin * / CD248 molecule*ENSDARG0000007793812
cd248a / CD248 molecule, endosialin a / CD248* / Q9HCU0* / Q91V98* / Endosialin * / CD248 molecule*ENSDARG0000010371311
scube2 / signal peptide, CUB domain, EGF-like 2 / Q9NQ36* / Q9JJS0* / signal peptide, CUB domain and EGF like domain containing 2* / Signal peptide, CUB and EGF-like domain-containing protein 2 *ENSDARG000000373629
scube1 / signal peptide, CUB domain, EGF-like 1 / Q6NZL8* / Q8IWY4* / signal peptide, CUB domain and EGF like domain containing 1*ENSDARG000000630979
thbd / thrombomodulin / P07204* / P15306*ENSDARG000000924709
scube3 / signal peptide, CUB domain, EGF-like 3 / Q8IX30* / signal peptide, CUB domain and EGF like domain containing 3*ENSDARG000000114908
si:dkey-163f14.6ENSDARG000000916027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR019466  Matrilin, coiled-coil trimerisation domain
 IPR030765  Matrilin 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
ECM proteoglycans
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr