ENSDARG00000069265


Danio rerio

Features
Gene ID: ENSDARG00000069265
  
Biological name :matn3b
  
Synonyms : matn3b / matrilin 3b
  
Possible biological names infered from orthology : MATN3 / matrilin 3 / O15232 / O35701
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 32627444
Gene end: 32635885
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123200
Ensembl peptide - ENSDARP00000091423
Ensembl peptide - ENSDARP00000116044
Ensembl peptide - ENSDARP00000122906
NCBI entrez gene - 497645     See in Manteia.
RefSeq - NM_001012385
RefSeq Peptide - NP_001012385
swissprot - B7ZD91
swissprot - Q5NIW0
swissprot - Q5NJJ6
swissprot - Q5NJJ7
ZFIN ID - ZDB-GENE-050221-9
Ensembl - ENSDARG00000069265
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MATN3ENSGALG00000016478Gallus gallus
 MATN3ENSG00000132031Homo sapiens
 Matn3ENSMUSG00000020583Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
matn3a / matrilin 3a / MATN3* / O35701* / O15232* / matrilin 3*ENSDARG0000006924544
matn4 / matrilin 4 / Q8VCP9* / O95460* / Q86T13* / CLEC14A* / C-type lectin domain containing 14A* / C-type lectin domain family 14 member A *ENSDARG0000001594729
matn1 / matrilin 1 / P21941* / P51942* / Cartilage matrix protein * / matrilin 1, cartilage matrix protein*ENSDARG0000003021526
vwa1 / von Willebrand factor A domain containing 1 / Q6PCB0* / Q8R2Z5*ENSDARG0000007546814
cd248b / CD248 molecule, endosialin b / CD248* / Q9HCU0* / Q91V98* / Endosialin * / CD248 molecule*ENSDARG000000779388
cd248a / CD248 molecule, endosialin a / CD248* / Q9HCU0* / Q91V98* / Endosialin * / CD248 molecule*ENSDARG000001037138
scube2 / signal peptide, CUB domain, EGF-like 2 / Q9NQ36* / Q9JJS0* / signal peptide, CUB domain and EGF like domain containing 2* / Signal peptide, CUB and EGF-like domain-containing protein 2 *ENSDARG000000373627
thbd / thrombomodulin / P07204* / P15306*ENSDARG000000924706
scube1 / signal peptide, CUB domain, EGF-like 1 / Q6NZL8* / Q8IWY4* / signal peptide, CUB domain and EGF like domain containing 1*ENSDARG000000630976
scube3 / signal peptide, CUB domain, EGF-like 3 / Q8IX30* / signal peptide, CUB domain and EGF like domain containing 3*ENSDARG000000114906
si:dkey-163f14.6ENSDARG000000916024


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR002035  von Willebrand factor, type A
 IPR013032  EGF-like, conserved site
 IPR019466  Matrilin, coiled-coil trimerisation domain
 IPR030765  Matrilin 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
ECM proteoglycans
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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