ENSDARG00000075441


Danio rerio

Features
Gene ID: ENSDARG00000075441
  
Biological name :vwa2
  
Synonyms : von Willebrand factor A domain containing 2 / vwa2
  
Possible biological names infered from orthology : Q5GFL6 / Q70UZ7
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 30312308
Gene end: 30345444
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127116
Ensembl peptide - ENSDARP00000146377
NCBI entrez gene - 567428     See in Manteia.
swissprot - U3JA51
ZFIN ID - ZDB-GENE-100302-1
Ensembl - ENSDARG00000075441
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VWA2ENSGALG00000008980Gallus gallus
 VWA2ENSG00000165816Homo sapiens
 Vwa2ENSMUSG00000025082Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
col14a1a / collagen, type XIV, alpha 1a / Q80X19* / Q05707* / COL14A1* / Collagen alpha-1(XIV) chain * / collagen type XIV alpha 1 chain*ENSDARG0000000576224
col12a1b / collagen, type XII, alpha 1b / Q99715* / Q60847* / COL12A1* / Collagen alpha-1(XII) chain * / collagen type XII alpha 1 chain*ENSDARG0000001960123
col12a1a / collagen, type XII, alpha 1a / Q99715* / Q60847* / COL12A1* / Collagen alpha-1(XII) chain * / collagen type XII alpha 1 chain*ENSDARG0000007832221
col7a1 / collagen, type VII, alpha 1 / Q63870* / Q02388* / Collagen alpha-1(VII) chain * / collagen type VII alpha 1 chain*ENSDARG0000002172020
col6a4a / collagen, type VI, alpha 4a / A2AX52* / Col6a4* / Collagen alpha-4(VI) chain *ENSDARG0000007975220
col6a3 / collagen, type VI, alpha 3 / P12111* / collagen type VI alpha 3 chain*ENSDARG0000007713919
col7a1l / collagen type VII alpha 1-likeENSDARG0000006969217
col6a3 / collagen, type VI, alpha 3 / P12111* / collagen type VI alpha 3 chain*ENSDARG0000009591514
col14a1b / collagen, type XIV, alpha 1b / Q80X19* / Q05707* / COL14A1* / Collagen alpha-1(XIV) chain * / collagen type XIV alpha 1 chain*ENSDARG0000007662310
si:ch211-62a1.3 / COL6A5* / COL6A6* / A6NMZ7* / A8TX70* / Q8C6K9* / Collagen alpha-6(VI) chain * / collagen type VI alpha 5 chain* / collagen type VI alpha 6 chain*ENSDARG000001124199
coch / coagulation factor C homolog, cochlin (Limulus polyphemus) / O43405* / Q62507* / cochlin*ENSDARG000000240328
ch1073-291c23.1 / VIT* / Q6UXI7* / Q8VHI5* / vitrin*ENSDARG000000636318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR030755  von Willebrand factor A domain-containing protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010669 epithelial structure maintenance IGI
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000180 caudal vein caudal vein blistered , abnormal
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 ZFA:0001058 caudal fin caudal fin blistered , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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