ENSDARG00000076623


Danio rerio

Features
Gene ID: ENSDARG00000076623
  
Biological name :col14a1b
  
Synonyms : col14a1b / collagen, type XIV, alpha 1b
  
Possible biological names infered from orthology : COL14A1 / Collagen alpha-1(XIV) chain / collagen type XIV alpha 1 chain / Q05707 / Q80X19
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 49721
Gene end: 61467
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132600
Ensembl peptide - ENSDARP00000136988
Ensembl peptide - ENSDARP00000137685
swissprot - A0A0R4IEC5
swissprot - A0A0R4IP59
swissprot - A0A0R4IS09
ZFIN ID - ZDB-GENE-030131-1985
Ensembl - ENSDARG00000076623
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COL14A1ENSGALG00000037675Gallus gallus
 Q05707ENSG00000187955Homo sapiens
 Q80X19ENSMUSG00000022371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
col14a1a / collagen, type XIV, alpha 1a / Q80X19* / Q05707* / COL14A1* / Collagen alpha-1(XIV) chain * / collagen type XIV alpha 1 chain*ENSDARG0000000576261
col12a1b / collagen, type XII, alpha 1b / Q99715* / Q60847* / COL12A1* / Collagen alpha-1(XII) chain * / collagen type XII alpha 1 chain*ENSDARG0000001960144
col12a1a / collagen, type XII, alpha 1a / Q99715* / Q60847* / COL12A1* / Collagen alpha-1(XII) chain * / collagen type XII alpha 1 chain*ENSDARG0000007832240
col7a1 / collagen, type VII, alpha 1 / Q63870* / Q02388* / Collagen alpha-1(VII) chain * / collagen type VII alpha 1 chain*ENSDARG0000002172024
col7a1l / collagen type VII alpha 1-likeENSDARG0000006969224
col6a3 / collagen, type VI, alpha 3 / P12111* / collagen type VI alpha 3 chain*ENSDARG0000007713915
col6a4a / collagen, type VI, alpha 4a / A2AX52* / Col6a4* / Collagen alpha-4(VI) chain *ENSDARG0000007975214
ch1073-291c23.1 / VIT* / Q6UXI7* / Q8VHI5* / vitrin*ENSDARG0000006363111
vwa2 / von Willebrand factor A domain containing 2 / Q5GFL6* / Q70UZ7*ENSDARG0000007544111
coch / coagulation factor C homolog, cochlin (Limulus polyphemus) / O43405* / Q62507* / cochlin*ENSDARG0000002403210
col6a3 / collagen, type VI, alpha 3 / P12111* / collagen type VI alpha 3 chain*ENSDARG000000959157
si:ch211-62a1.3 / COL6A5* / COL6A6* / A6NMZ7* / A8TX70* / Q8C6K9* / Collagen alpha-6(VI) chain * / collagen type VI alpha 5 chain* / collagen type VI alpha 6 chain*ENSDARG000001124197


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR003961  Fibronectin type III
 IPR008160  Collagen triple helix repeat
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes
Assembly of collagen fibrils and other multimeric structures
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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