ENSGALG00000037675


Gallus gallus

Features
Gene ID: ENSGALG00000037675
  
Biological name :COL14A1
  
Synonyms : COL14A1 / collagen alpha-1(XIV) chain precursor
  
Possible biological names infered from orthology : Collagen alpha-1(XIV) chain / collagen type XIV alpha 1 chain / Q05707 / Q80X19
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 136894050
Gene end: 137014125
  
Corresponding Affymetrix probe sets: Gga.13901.1.S1_at (Chicken Array)   Gga.16343.1.S1_at (Chicken Array)   Gga.2558.1.S1_a_at (Chicken Array)   Gga.2558.3.S1_a_at (Chicken Array)   Gga.5089.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043986
Ensembl peptide - ENSGALP00000051959
Ensembl peptide - ENSGALP00000051955
Ensembl peptide - ENSGALP00000047640
Ensembl peptide - ENSGALP00000046132
NCBI entrez gene - 396276     See in Manteia.
RefSeq - XM_015283066
RefSeq - XM_015283059
RefSeq - XM_015283060
RefSeq - XM_015283061
RefSeq - XM_015283063
RefSeq - XM_015283064
RefSeq - XM_015283065
RefSeq - NM_205334
RefSeq - XM_015283058
RefSeq Peptide - NP_990665
swissprot - A0A1D5PGN2
swissprot - A0A1D5P4M8
swissprot - A0A1D5P0F4
swissprot - A0A1D5NUG9
swissprot - A0A1D5PGN6
Ensembl - ENSGALG00000037675
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col14a1aENSDARG00000005762Danio rerio
 col14a1bENSDARG00000076623Danio rerio
 Q05707ENSG00000187955Homo sapiens
 Q80X19ENSMUSG00000022371Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL12A1 / collagen type XII alpha 1 chain / Q60847* / Q99715* / Collagen alpha-1(XII) chain *ENSGALG0000001590847
COL20A1 / collagen type XX alpha 1 chain / Q923P0* / Q9P218* / Collagen alpha-1(XX) chain *ENSGALG0000000579731
COL6A3 / collagen type VI alpha 3 chain / P12111* / collagen, type VI, alpha 3*ENSGALG0000000392318
COL7A1* / Q02388* / Q63870* / Collagen alpha-1(VII) chain * / collagen type VII alpha 1 chain*ENSGALG0000000581114
VWA2 / von Willebrand factor A domain containing 2 / Q5GFL6* / Q70UZ7*ENSGALG0000000898010
VIT / vitrin precursor / Q6UXI7* / Q8VHI5* / vitrin*ENSGALG000000105836
COCH / O42163 / Cochlin / O43405* / Q62507*ENSGALG000000099205
ENSGALG000000358542


Protein motifs (from Interpro)
Interpro ID Name
 IPR001791  Laminin G domain
 IPR002035  von Willebrand factor, type A
 IPR003961  Fibronectin type III
 IPR008160  Collagen triple helix repeat
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0031012 extracellular matrix IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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