ENSGALG00000010583


Gallus gallus

Features
Gene ID: ENSGALG00000010583
  
Biological name :VIT
  
Synonyms : VIT / vitrin precursor
  
Possible biological names infered from orthology : Q6UXI7 / Q8VHI5 / vitrin
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 32232091
Gene end: 32274545
  
Corresponding Affymetrix probe sets: GgaAffx.6694.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017204
Ensembl peptide - ENSGALP00000057932
NCBI entrez gene - 421471     See in Manteia.
RefSeq - NM_001024580
RefSeq - XM_015283726
RefSeq - XM_015283727
RefSeq Peptide - NP_001019751
swissprot - E1C6X0
swissprot - A0A1D5PY83
Ensembl - ENSGALG00000010583
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ch1073-291c23.1ENSDARG00000063631Danio rerio
 VITENSG00000205221Homo sapiens
 VitENSMUSG00000024076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COCH / O42163 / Cochlin / O43405* / Q62507*ENSGALG0000000992032
COL6A3 / collagen type VI alpha 3 chain / P12111* / collagen, type VI, alpha 3*ENSGALG0000000392319
COL14A1 / collagen alpha-1(XIV) chain precursor / Q80X19* / Q05707* / Collagen alpha-1(XIV) chain * / collagen type XIV alpha 1 chain*ENSGALG0000003767515
COL12A1 / collagen type XII alpha 1 chain / Q60847* / Q99715* / Collagen alpha-1(XII) chain *ENSGALG0000001590814
VWA2 / von Willebrand factor A domain containing 2 / Q5GFL6* / Q70UZ7*ENSGALG000000089809
COL7A1* / Q02388* / Q63870* / Collagen alpha-1(VII) chain * / collagen type VII alpha 1 chain*ENSGALG000000058117
COL20A1 / collagen type XX alpha 1 chain / Q923P0* / Q9P218* / Collagen alpha-1(XX) chain *ENSGALG000000057974
ENSGALG000000358541


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR004043  LCCL domain
 IPR030763  Vitrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 cellular_componentGO:0005614 interstitial matrix IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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