ENSG00000205221


Homo sapiens

Features
Gene ID: ENSG00000205221
  
Biological name :VIT
  
Synonyms : Q6UXI7 / VIT / vitrin
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p22.2
Gene start: 36696690
Gene end: 36814792
  
Corresponding Affymetrix probe sets: 227899_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000393561
Ensembl peptide - ENSP00000385658
Ensembl peptide - ENSP00000417874
Ensembl peptide - ENSP00000419251
Ensembl peptide - ENSP00000368543
Ensembl peptide - ENSP00000368544
Ensembl peptide - ENSP00000374625
Ensembl peptide - ENSP00000384154
NCBI entrez gene - 5212     See in Manteia.
OMIM - 617693
RefSeq - XM_017004328
RefSeq - NM_001177970
RefSeq - NM_001177971
RefSeq - NM_001177972
RefSeq - NM_053276
RefSeq - XM_011532905
RefSeq - XM_011532906
RefSeq - XM_017004325
RefSeq - XM_017004326
RefSeq - XM_017004327
RefSeq - NM_001177969
RefSeq Peptide - NP_001171441
RefSeq Peptide - NP_001171442
RefSeq Peptide - NP_001171443
RefSeq Peptide - NP_444506
RefSeq Peptide - NP_001171440
swissprot - H7C587
swissprot - Q6UXI7
swissprot - B5MD45
swissprot - C9J6F5
Ensembl - ENSG00000205221
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ch1073-291c23.1ENSDARG00000063631Danio rerio
 VITENSGALG00000010583Gallus gallus
 VitENSMUSG00000024076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COCH / O43405 / cochlinENSG0000010047335
A8TX70 / COL6A5 / collagen type VI alpha 5 chainENSG0000017275222
COL6A3 / P12111 / collagen type VI alpha 3 chainENSG0000016335922
A6NMZ7 / COL6A6 / collagen type VI alpha 6 chainENSG0000020638422
Q05707 / COL14A1 / collagen type XIV alpha 1 chainENSG0000018795516
Q99715 / COL12A1 / collagen type XII alpha 1 chainENSG0000011179916
COL7A1 / Q02388 / collagen type VII alpha 1 chainENSG0000011427012
VWA2 / Q5GFL6 / von Willebrand factor A domain containing 2ENSG0000016581610
Q9P218 / COL20A1 / collagen type XX alpha 1 chainENSG000001012035


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR004043  LCCL domain
 IPR030763  Vitrin
 IPR036465  von Willebrand factor A-like domain superfamily
 IPR036609  LCCL domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005614 interstitial matrix IEA
 molecular_functionGO:0005539 glycosaminoglycan binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr