ENSDARG00000076889


Danio rerio

Features
Gene ID: ENSDARG00000076889
  
Biological name :ralgapa1
  
Synonyms : ralgapa1 / Ral GTPase activating protein, alpha subunit 1 (catalytic)
  
Possible biological names infered from orthology : Q6GYP7 / Q6GYQ0 / Ral GTPase activating protein, alpha subunit 1 / Ral GTPase activating protein catalytic alpha subunit 1
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 12767640
Gene end: 12923574
  
Corresponding Affymetrix probe sets: Dr.25586.1.A1_at (Zebrafish Array)   Dr.25888.1.A1_at (Zebrafish Array)   Dr.9241.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000156452
Ensembl peptide - ENSDARP00000101097
Ensembl peptide - ENSDARP00000110470
Ensembl peptide - ENSDARP00000127647
Ensembl peptide - ENSDARP00000128011
Ensembl peptide - ENSDARP00000128916
Ensembl peptide - ENSDARP00000150677
NCBI entrez gene - 556427     See in Manteia.
RefSeq - XM_021467316
swissprot - F1R073
swissprot - X1WBQ5
swissprot - F1QRR8
swissprot - X1WFB2
swissprot - X1WCR4
ZFIN ID - ZDB-GENE-080806-1
Ensembl - ENSDARG00000076889
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RALGAPA1ENSGALG00000010088Gallus gallus
 Q6GYQ0ENSG00000174373Homo sapiens
 Q6GYP7ENSMUSG00000021027Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ralgapa2 / Ral GTPase activating protein, alpha subunit 2 (catalytic) / Q2PPJ7* / A3KGS3* / Ral GTPase-activating protein subunit alpha-2 * / Ral GTPase activating protein catalytic alpha subunit 2*ENSDARG0000000586146
tsc2 / TSC complex subunit 2ENSDARG0000010312512
sipa1l1 / signal-induced proliferation-associated 1 like 1 / O43166* / Q8C0T5* / Signal-induced proliferation-associated 1-like protein 1 *ENSDARG000000201349
sipa1l3 / signal-induced proliferation-associated 1 like 3 / G3X9J0* / O60292*ENSDARG000000616998
sipa1l2 / signal-induced proliferation-associated 1 like 2 / Q80TE4* / Q9P2F8* / Mus musculus signal-induced proliferation-associated 1 like 2 (Sipa1l2), transcript variant 2, mRNA.*ENSDARG000000616408
A5PF44 / si:ch211-182d3.1 / GARNL3* / Q5VVW2* / GTPase activating Rap/RanGAP domain like 3*ENSDARG000000606315
zmp:0000001168 / SIPA1* / Q96FS4* / signal-induced proliferation-associated 1*ENSDARG000000766975
si:dkey-166d12.2 / P47736* / RAP1GAP* / RAP1 GTPase activating protein*ENSDARG000000532724
rap1gap / RAP1 GTPase activating protein / A2ALS5* / P47736* / Mus musculus Rap1 GTPase-activating protein (Rap1gap), transcript variant 5, mRNA.*ENSDARG000000565544
rap1gap2b / RAP1 GTPase activating protein 2b / Q5SVL6* / Q684P5* / RAP1GAP2* / RAP1 GTPase activating protein 2*ENSDARG000000742224
si:ch1073-90m23.1ENSDARG000000915733
rap1gap2a / RAP1 GTPase activating protein 2a / Q5SVL6* / Q684P5* / RAP1GAP2* / RAP1 GTPase activating protein 2*ENSDARG000000615512
CABZ01067150.1ENSDARG000001161221


Protein motifs (from Interpro)
Interpro ID Name
 IPR000331  Rap GTPase activating protein domain
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR027107  Tuberin/Ral GTPase-activating protein subunit alpha


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0051056 regulation of small GTPase mediated signal transduction IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005096 GTPase activator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001114 head head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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