ENSDARG00000078352


Danio rerio

Features
Gene ID: ENSDARG00000078352
  
Biological name :lyrm4
  
Synonyms : B8JLQ0 / lyrm4 / LYR motif containing 4
  
Possible biological names infered from orthology : LYR motif-containing protein 4 / Q8K215 / Q9HD34
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 20980162
Gene end: 20981907
  
Corresponding Affymetrix probe sets: Dr.13974.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103510
NCBI entrez gene - 100302660     See in Manteia.
swissprot - B8JLQ0
ZFIN ID - ZDB-GENE-081104-295
Ensembl - ENSDARG00000078352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LYRM4ENSGALG00000027339Gallus gallus
 LYRM4ENSG00000214113Homo sapiens
 Lyrm4ENSMUSG00000046573Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LYRM4 / si:ch211-152c8.4 / Q8K215* / Q9HD34* / LYR motif containing 4* / LYR motif-containing protein 4 *ENSDARG0000010111057


Protein motifs (from Interpro)
Interpro ID Name
 IPR008011  Complex 1 LYR protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005739 mitochondrion IEA


Pathways (from Reactome)
Pathway description
Mitochondrial iron-sulfur cluster biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000026582 iscub / iron-sulfur cluster assembly enzyme b / ISCU* / Q9D7P6* / Q9H1K1* / iron-sulfur cluster assembly enzyme* / Iron-sulfur cluster assembly enzyme ISCU, mitochondrial *  / complex
 ENSDARG00000078352 lyrm4 / B8JLQ0 / LYR motif containing 4 / Q8K215* / Q9HD34* / LYR motif-containing protein 4 *  / complex
 ENSDARG00000062237 nfs1 / NFS1 cysteine desulfurase / Q9Y697* / Q9Z1J3* / AL109827.1* / Cysteine desulfurase, mitochondrial *  / complex
 ENSDARG00000101110 LYRM4 / si:ch211-152c8.4 / Q8K215* / Q9HD34* / LYR motif containing 4* / LYR motif-containing protein 4 *  / complex






 

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