ENSG00000214113


Homo sapiens

Features
Gene ID: ENSG00000214113
  
Biological name :LYRM4
  
Synonyms : LYRM4 / LYR motif containing 4 / Q9HD34
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p25.1
Gene start: 5102593
Gene end: 5260939
  
Corresponding Affymetrix probe sets: 218561_s_at (Human Genome U133 Plus 2.0 Array)   222672_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418787
Ensembl peptide - ENSP00000417885
Ensembl peptide - ENSP00000418321
Ensembl peptide - ENSP00000419928
Ensembl peptide - ENSP00000443900
Ensembl peptide - ENSP00000420026
NCBI entrez gene - 57128     See in Manteia.
OMIM - 613311
RefSeq - NM_001318782
RefSeq - NM_001164840
RefSeq - NM_001164841
RefSeq - NM_020408
RefSeq Peptide - NP_001158312
RefSeq Peptide - NP_065141
RefSeq Peptide - NP_001305711
RefSeq Peptide - NP_001158313
swissprot - Q9HD34
swissprot - C9J799
swissprot - C9JRX8
swissprot - C9JY28
swissprot - F5H189
swissprot - H7C4Q5
Ensembl - ENSG00000214113
  
Related genetic diseases (OMIM): 615595 - ?Combined oxidative phosphorylation deficiency 19, 615595
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lyrm4ENSDARG00000078352Danio rerio
 LYRM4ENSDARG00000101110Danio rerio
 LYRM4ENSGALG00000027339Gallus gallus
 Lyrm4ENSMUSG00000046573Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008011  Complex 1 LYR protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0044281 small molecule metabolic process TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 cellular_componentGO:0016604 nuclear body IDA


Pathways (from Reactome)
Pathway description
Mitochondrial iron-sulfur cluster biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001397 Hepatic steatosis 
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 HP:0001508 Failure to thrive 
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 HP:0002098 Respiratory distress 
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000244005 NFS1 / Q9Y697 / NFS1, cysteine desulfurase  / complex
 ENSG00000136003 ISCU / Q9H1K1 / iron-sulfur cluster assembly enzyme  / complex
 ENSG00000165060 FXN / Q16595 / frataxin  / complex
 ENSG00000214113 LYRM4 / Q9HD34 / LYR motif containing 4  / complex






 

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