ENSG00000136003


Homo sapiens

Features
Gene ID: ENSG00000136003
  
Biological name :ISCU
  
Synonyms : iron-sulfur cluster assembly enzyme / ISCU / Q9H1K1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q23.3
Gene start: 108562582
Gene end: 108569384
  
Corresponding Affymetrix probe sets: 209075_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000437854
Ensembl peptide - ENSP00000411108
Ensembl peptide - ENSP00000443272
Ensembl peptide - ENSP00000446606
Ensembl peptide - ENSP00000445598
Ensembl peptide - ENSP00000310623
Ensembl peptide - ENSP00000376554
NCBI entrez gene - 23479     See in Manteia.
OMIM - 611911
RefSeq - XM_011538101
RefSeq - NM_001301140
RefSeq - NM_001301141
RefSeq - NM_001320042
RefSeq - NM_014301
RefSeq - NM_213595
RefSeq - XM_011538100
RefSeq Peptide - NP_998760
RefSeq Peptide - NP_001288069
RefSeq Peptide - NP_001288070
RefSeq Peptide - NP_001306971
RefSeq Peptide - NP_055116
swissprot - B4DNC9
swissprot - B3KQ30
swissprot - Q9H1K1
swissprot - A0A024RBI3
swissprot - F5H5N2
swissprot - F5H672
Ensembl - ENSG00000136003
  
Related genetic diseases (OMIM): 255125 - Myopathy with lactic acidosis, hereditary, 255125
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ISCU (1 of many)ENSDARG00000035596Danio rerio
 iscubENSDARG00000026582Danio rerio
 ISCUENSGALG00000004869Gallus gallus
 IscuENSMUSG00000025825Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002871  NIF system FeS cluster assembly, NifU, N-terminal
 IPR011339  ISC system FeS cluster assembly, IscU scaffold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006879 cellular iron ion homeostasis IBA
 biological_processGO:0016226 iron-sulfur cluster assembly IEA
 biological_processGO:0044281 small molecule metabolic process TAS
 biological_processGO:0097428 protein maturation by iron-sulfur cluster transfer IBA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008198 ferrous iron binding IBA
 molecular_functionGO:0032947 protein-containing complex scaffold activity IDA
 molecular_functionGO:0036455 iron-sulfur transferase activity IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051537 2 iron, 2 sulfur cluster binding IBA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001924 Sideroblastic anemia 
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 HP:0001962 Palpitations 
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 HP:0002094 Dyspnea 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002913 Myoglobinuria 
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 HP:0003128 Lactic acidemia "An abnormal buildup of `lactic acid` (CHEBI:28358) in the body, leading to `acidification` (GO:0045851) of the blood." [HPO:probinson]
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 HP:0003198 Myopathy 
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 HP:0003201 Rhabdomyolysis 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003394 Muscle cramps 
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 HP:0003546 Exercise intolerance 
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 HP:0003548 Electron microscopy shows subsarcolemmal accumulations of abnormally shaped mitochondria 
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 HP:0003621 Juvenile onset 
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 HP:0003737 Mitochondrial myopathy 
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 HP:0008306 Abnormal iron deposition in mitochondria 
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 HP:0008314 Decreased activity of mitochondrial complex ii 
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 HP:0011923 Decreased activity of mitochondrial complex I "A reduction in the activity of the `mitochondrial respiratory chain complex I` (GO:0005747), which is part of the electron transport chain in mitochondria." [HPO:probinson]
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 HP:0011924 Decreased activity of mitochondrial complex III "A reduction in the activity of the `mitochondrial respiratory chain complex III` (GO:0005750), which is part of the electron transport chain in mitochondria." [HPO:probinson]
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 HP:0012240 Increased intramyocellular lipid droplets "An abnormal increase in intracellular lipid droplets In a muscle. The number and size of these drops can increase with somd disorders of lipid metabolism affecting muscle. See pmid 20691590 for histological images." [HPO:probinson, pmid:20691590]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000165060 FXN / Q16595 / frataxin  / complex
 ENSG00000136003 ISCU / Q9H1K1 / iron-sulfur cluster assembly enzyme  / complex
 ENSG00000244005 NFS1 / Q9Y697 / NFS1, cysteine desulfurase  / complex
 ENSG00000214113 LYRM4 / Q9HD34 / LYR motif containing 4  / complex






 

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