ENSDARG00000101110


Danio rerio

Features
Gene ID: ENSDARG00000101110
  
Biological name :LYRM4
  
Synonyms : LYRM4 / si:ch211-152c8.4
  
Possible biological names infered from orthology : LYR motif containing 4 / LYR motif-containing protein 4 / Q8K215 / Q9HD34
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 2736815
Gene end: 2821768
  
Corresponding Affymetrix probe sets: Dr.13755.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138356
Ensembl peptide - ENSDARP00000147532
NCBI entrez gene - 103909737     See in Manteia.
swissprot - A0A0R4IAA2
swissprot - A0A0R4IUH3
ZFIN ID - ZDB-GENE-091204-235
Ensembl - ENSDARG00000101110
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LYRM4ENSGALG00000027339Gallus gallus
 LYRM4ENSG00000214113Homo sapiens
 Lyrm4ENSMUSG00000046573Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lyrm4 / B8JLQ0 / LYR motif containing 4 / Q8K215* / Q9HD34* / LYR motif-containing protein 4 *ENSDARG0000007835256


Protein motifs (from Interpro)
Interpro ID Name
 IPR008011  Complex 1 LYR protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Mitochondrial iron-sulfur cluster biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000026582 iscub / iron-sulfur cluster assembly enzyme b / ISCU* / Q9D7P6* / Q9H1K1* / iron-sulfur cluster assembly enzyme* / Iron-sulfur cluster assembly enzyme ISCU, mitochondrial *  / complex
 ENSDARG00000062237 nfs1 / NFS1 cysteine desulfurase / Q9Y697* / Q9Z1J3* / AL109827.1* / Cysteine desulfurase, mitochondrial *  / complex
 ENSDARG00000101110 LYRM4 / si:ch211-152c8.4 / Q8K215* / Q9HD34* / LYR motif containing 4* / LYR motif-containing protein 4 *  / complex
 ENSDARG00000078352 lyrm4 / B8JLQ0 / LYR motif containing 4 / Q8K215* / Q9HD34* / LYR motif-containing protein 4 *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr