ENSDARG00000087394


Danio rerio

Features
Gene ID: ENSDARG00000087394
  
Biological name :tshz3a
  
Synonyms : teashirt zinc finger homeobox 3a / tshz3a
  
Possible biological names infered from orthology : Q63HK5 / teashirt zinc finger homeobox 3 / TSHZ3
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 14731784
Gene end: 14743659
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106276
Ensembl peptide - ENSDARP00000112946
NCBI entrez gene - 558522     See in Manteia.
swissprot - A5WWF5
swissprot - F1QL82
ZFIN ID - ZDB-GENE-100322-1
Ensembl - ENSDARG00000087394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSHZ3ENSGALG00000004528Gallus gallus
 TSHZ3ENSG00000121297Homo sapiens
 Tshz3ENSMUSG00000021217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tshz3b / teashirt zinc finger homeobox 3b / TSHZ3* / Q63HK5* / teashirt zinc finger homeobox 3*ENSDARG0000010336148
tshz1 / B3DJM5 / teashirt zinc finger homeobox 1 / Q6ZSZ6* / Q5DTH5* / Teashirt homolog 1 *ENSDARG0000000502640
tshz2 / teashirt zinc finger homeobox 2 / Q9NRE2*ENSDARG0000007920135


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR013087  Zinc finger C2H2-type
 IPR026810  Teashirt homologue 3
 IPR027008  Teashirt family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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