ENSDARG00000103361


Danio rerio

Features
Gene ID: ENSDARG00000103361
  
Biological name :tshz3b
  
Synonyms : teashirt zinc finger homeobox 3b / tshz3b
  
Possible biological names infered from orthology : Q63HK5 / teashirt zinc finger homeobox 3 / TSHZ3
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 46727891
Gene end: 46782264
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000149711
Ensembl peptide - ENSDARP00000156774
Ensembl peptide - ENSDARP00000131836
Ensembl peptide - ENSDARP00000142990
NCBI entrez gene - 565811     See in Manteia.
RefSeq - NM_001195407
RefSeq Peptide - NP_001182336
swissprot - A0A0R4IDX7
ZFIN ID - ZDB-GENE-100319-2
Ensembl - ENSDARG00000103361
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSHZ3ENSGALG00000004528Gallus gallus
 TSHZ3ENSG00000121297Homo sapiens
 Tshz3ENSMUSG00000021217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tshz1 / B3DJM5 / teashirt zinc finger homeobox 1 / Q6ZSZ6* / Q5DTH5* / Teashirt homolog 1 *ENSDARG0000000502645
tshz3a / teashirt zinc finger homeobox 3a / TSHZ3* / Q63HK5* / teashirt zinc finger homeobox 3*ENSDARG0000008739443
tshz2 / teashirt zinc finger homeobox 2 / Q9NRE2*ENSDARG0000007920139


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR026810  Teashirt homologue 3
 IPR027008  Teashirt family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr