ENSDARG00000099558


Danio rerio

Features
Gene ID: ENSDARG00000099558
  
Biological name :NPC1L1
  
Synonyms : NPC1L1 / NPC1 like intracellular cholesterol transporter 1
  
Possible biological names infered from orthology : Q9UHC9
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 40532304
Gene end: 40555340
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133903
swissprot - A0A0G2KNF5
Ensembl - ENSDARG00000099558
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NPC1L1ENSG00000015520Homo sapiens
 Npc1l1ENSMUSG00000020447Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
npc1 / Niemann-Pick disease, type C1 / O15118* / O35604* / Niemann-Pick C1 protein * / NPC intracellular cholesterol transporter 1*ENSDARG0000001718036
ptch2 / patched 2 / 2 * / O35595* / Q9Y6C5*ENSDARG0000005502616
ptch1 / patched 1 / Q13635* / Q61115* / Mus musculus patched 1 (Ptch1), transcript variant 2, mRNA.*ENSDARG0000001640415
si:ch211-250m6.7 / PTCHD3* / Q0EEE2* / Q3KNS1* / patched domain containing 3*ENSDARG0000006887411
ptchd1 / patched domain containing 1 / Q14B62* / Q96NR3* / Patched domain-containing protein 1 *ENSDARG0000001806610
ptchd4 / Q5RIV7 / patched domain containing 4 / Q6ZW05* / Mus musculus patched domain containing 4 (Ptchd4), transcript variant 1, mRNA.*ENSDARG0000000824910
CR792422.1 / PTCHD3* / Q3KNS1* / patched domain containing 3*ENSDARG000000100757
ptch1 / patched 1 / Q13635* / Q61115* / Mus musculus patched 1 (Ptch1), transcript variant 2, mRNA.*ENSDARG000000958592


Protein motifs (from Interpro)
Interpro ID Name
 IPR000731  Sterol-sensing domain
 IPR032190  Niemann-Pick C1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Intestinal lipid absorption


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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