ENSDARG00000100296


Danio rerio

Features
Gene ID: ENSDARG00000100296
  
Biological name :pja2
  
Synonyms : pja2 / praja ring finger ubiquitin ligase 2
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase Praja-1 / E3 ubiquitin-protein ligase Praja-2 / O43164 / O55176 / PJA1 / praja ring finger ubiquitin ligase 1 / Q80U04 / Q8NG27
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 57210237
Gene end: 57234118
  
Corresponding Affymetrix probe sets: Dr.6114.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138079
NCBI entrez gene - 565118     See in Manteia.
RefSeq - NM_001105116
RefSeq - XM_009301875
RefSeq Peptide - NP_001098586
swissprot - A0A0R4IPD9
ZFIN ID - ZDB-GENE-060526-337
Ensembl - ENSDARG00000100296
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000000264Gallus gallus
 PJA1ENSG00000181191Homo sapiens
 PJA2ENSG00000198961Homo sapiens
 Pja1ENSMUSG00000034403Mus musculus
 Pja2ENSMUSG00000024083Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf126 / ring finger protein 126 / Q9BV68*ENSDARG000001040769
rnf115 / ring finger protein 115 / Q9D0C1* / Q9Y4L5* / E3 ubiquitin-protein ligase RNF115 *ENSDARG000000624508
si:ch211-81a5.1 / Q9Y4L5* / Q9D0C1* / RNF115* / ring finger protein 115* / E3 ubiquitin-protein ligase RNF115 *ENSDARG000000629007
rnf181 / Q7ZW78 / ring finger protein 181 / Q9CY62* / Q9P0P0* / Mus musculus ring finger protein 181 (Rnf181), transcript variant 11, mRNA.*ENSDARG000000239585


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000135 notochord notochord morphology , abnormal
Show

 ZFA:0000155 somite somite shape , abnormal
Show

 ZFA:0001094 whole organism whole organism increased curvature , abnormal
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 ZFA:0001114 head head decreased size , abnormal
head apoptotic , abnormal
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 ZFA:0001117 post-vent region post-vent region decreased length , abnormal
post-vent region increased curvature , abnormal
post-vent region deformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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