ENSDARG00000100670


Danio rerio

Features
Gene ID: ENSDARG00000100670
  
Biological name :pcdh1g31
  
Synonyms : pcdh1g31 / protocadherin 1 gamma 31
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 21804772
Gene end: 21820057
  
Corresponding Affymetrix probe sets: Dr.8598.1.A1_at (Zebrafish Array)   NM_001024127_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000139389
NCBI entrez gene - 554015     See in Manteia.
RefSeq - NM_001024127
RefSeq Peptide - NP_001019298
swissprot - E7F1K6
ZFIN ID - ZDB-GENE-050609-24
Ensembl - ENSDARG00000100670
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcdh1g30 / protocadherin 1 gamma 30ENSDARG0000010186572
pcdh1g2 / protocadherin 1 gamma 2 / Q9Y5E8* / Q91XY4* / Pcdhga3* / Pcdhga4* / Pcdhga5* / Pcdhga6* / Pcdhga7* / Pcdhga8* / PCDHB15* / Pcdhga10* / Pcdhga11* / protocadherin beta 15* / Protoca...ENSDARG0000010123245
pcdh1gb9 / protocadherin 1 gamma b 9 / Q9Y5E8* / Q91XY4* / Pcdhga3* / Pcdhga4* / Pcdhga5* / Pcdhga6* / Pcdhga7* / Pcdhga8* / PCDHB15* / Pcdhga10* / Pcdhga11* / protocadherin beta 15* / Prot...ENSDARG0000008847541
pcdh1gb2 / protocadherin 1 gamma b 2 / Q9Y5E8* / Q91XY4* / Pcdhga3* / Pcdhga4* / Pcdhga5* / Pcdhga6* / Pcdhga7* / Pcdhga8* / PCDHB15* / Pcdhga10* / Pcdhga11* / protocadherin beta 15* / Prot...ENSDARG0000010130741
pcdh2g5 / pcdh2g17 / pcdh2g20 / pcdh2g28 / pcdh2g29 / pcdh2g13 / protocadherin 2 gamma 5 / Q9Y5E8* / PCDHB15* / protocadherin beta 15*ENSDARG0000009878841
si:ch73-233f7.1ENSDARG0000006190940
pcdh1a6 / pcdh1a4 / protocadherin 1 alpha 6 / Pcdha3* / Pcdha2* / protocadherin alpha 2* / protocadherin alpha 3*ENSDARG0000009717037
pcdh2ab5 / protocadherin 2 alpha b 5 / Pcdha3* / Pcdha2* / protocadherin alpha 2* / protocadherin alpha 3*ENSDARG0000009034837
pcdh10a / protocadherin 10a / PCDH10* / Q9P2E7* / protocadherin 10*ENSDARG0000009972936
PCDHB15 / protocadherin beta 15 / Q9Y5E8*ENSDARG0000010133835
pcdh2ab11 / protocadherin 2 alpha b 11 / Pcdha3* / Pcdha2* / protocadherin alpha 2* / protocadherin alpha 3*ENSDARG0000008959334
pcdh17 / protocadherin 17 / O14917*ENSDARG0000002704131
pcdh18a / protocadherin 18a / PCDH18* / Q9HCL0* / protocadherin 18*ENSDARG0000008980530
pcdh19 / protocadherin 19 / Q80TF3* / Q8TAB3*ENSDARG0000003434429
pcdh12 / protocadherin 12 / O55134* / Q9NPG4*ENSDARG0000007659428
pcdh18b / protocadherin 18b / Q9HCL0* / PCDH18* / Q8VHR0* / protocadherin 18*ENSDARG0000005249428
PCDH8 / si:ch211-199f5.1 / O95206* / Q7TSK3* / protocadherin 8*ENSDARG0000010218526
pcdh8 / protocadherin 8 / O95206*ENSDARG0000000646725


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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