ENSDARG00000101131


Danio rerio

Features
Gene ID: ENSDARG00000101131
  
Biological name :pbx1b
  
Synonyms : pbx1b / pre-B-cell leukemia homeobox 1b
  
Possible biological names infered from orthology : P40424 / P41778 / PBX1 / PBX homeobox 1 / Pre-B-cell leukemia transcription factor 1
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 2271559
Gene end: 2395013
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139425
NCBI entrez gene - 570960     See in Manteia.
swissprot - F1QSY5
ZFIN ID - ZDB-GENE-070424-11
Ensembl - ENSDARG00000101131
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PBX1ENSGALG00000003429Gallus gallus
 PBX1ENSG00000185630Homo sapiens
 Pbx1ENSMUSG00000052534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pbx1a / pre-B-cell leukemia homeobox 1a / PBX1* / P41778* / P40424* / PBX homeobox 1* / Pre-B-cell leukemia transcription factor 1 *ENSDARG0000010049493
pbx3a / pre-B-cell leukemia homeobox 3a / PBX3* / P40426* / O35317* / PBX homeobox 3* / Pre-B-cell leukemia transcription factor 3 *ENSDARG0000008926274
pbx3b / pre-B-cell leukemia homeobox 3b / PBX3* / P40426* / O35317* / PBX homeobox 3* / Pre-B-cell leukemia transcription factor 3 *ENSDARG0000001361566
pbx4 / pre-B-cell leukemia transcription factor 4 / Q99NE9* / Q9BYU1* / PBX homeobox 4* / Mus musculus pre B cell leukemia homeobox 4 (Pbx4), transcript variant 4, mRNA.*ENSDARG0000005215063
pbx2 / pre-B-cell leukemia homeobox 2 / O35984* / P40425* / PBX homeobox 2*ENSDARG0000001971763


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR005542  PBX
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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