ENSDARG00000089262


Danio rerio

Features
Gene ID: ENSDARG00000089262
  
Biological name :pbx3a
  
Synonyms : pbx3a / pre-B-cell leukemia homeobox 3a
  
Possible biological names infered from orthology : O35317 / P40426 / PBX3 / PBX homeobox 3 / Pre-B-cell leukemia transcription factor 3
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 5302932
Gene end: 5394468
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139961
Ensembl peptide - ENSDARP00000155669
Ensembl peptide - ENSDARP00000090846
Ensembl peptide - ENSDARP00000138297
swissprot - A0A0R4IUN1
swissprot - A0A0R4IYG4
swissprot - F1QSN0
ZFIN ID - ZDB-GENE-031218-1
Ensembl - ENSDARG00000089262
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PBX3ENSGALG00000000972Gallus gallus
 PBX3ENSG00000167081Homo sapiens
 Pbx3ENSMUSG00000038718Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pbx1a / pre-B-cell leukemia homeobox 1a / PBX1* / P41778* / P40424* / PBX homeobox 1* / Pre-B-cell leukemia transcription factor 1 *ENSDARG0000010049477
pbx1b / pre-B-cell leukemia homeobox 1b / PBX1* / P40424* / PBX homeobox 1*ENSDARG0000010113177
pbx3b / pre-B-cell leukemia homeobox 3b / PBX3* / P40426* / O35317* / PBX homeobox 3* / Pre-B-cell leukemia transcription factor 3 *ENSDARG0000001361569
pbx2 / pre-B-cell leukemia homeobox 2 / O35984* / P40425* / PBX homeobox 2*ENSDARG0000001971764
pbx4 / pre-B-cell leukemia transcription factor 4 / Q99NE9* / Q9BYU1* / PBX homeobox 4* / Mus musculus pre B cell leukemia homeobox 4 (Pbx4), transcript variant 4, mRNA.*ENSDARG0000005215063


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR005542  PBX
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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