ENSGALG00000000972


Gallus gallus

Features
Gene ID: ENSGALG00000000972
  
Biological name :PBX3
  
Synonyms : PBX3 / pre-B-cell leukemia transcription factor 3
  
Possible biological names infered from orthology : O35317 / P40426 / PBX homeobox 3
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 10212849
Gene end: 10309636
  
Corresponding Affymetrix probe sets: Gga.2797.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001434
Ensembl peptide - ENSGALP00000056546
Ensembl peptide - ENSGALP00000055423
Ensembl peptide - ENSGALP00000047186
NCBI entrez gene - 417093     See in Manteia.
RefSeq - NM_001030678
RefSeq Peptide - NP_001025849
swissprot - A0A1D5PUE3
swissprot - A0A1D5PRA0
swissprot - A0A1D5P3D1
swissprot - F1P3W1
Ensembl - ENSGALG00000000972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pbx3aENSDARG00000089262Danio rerio
 pbx3bENSDARG00000013615Danio rerio
 PBX3ENSG00000167081Homo sapiens
 Pbx3ENSMUSG00000038718Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PBX1 / PBX homeobox 1 / P40424* / P41778* / Pre-B-cell leukemia transcription factor 1 *ENSGALG0000000342984


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR005542  PBX
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002087 regulation of respiratory gaseous exchange by neurological system process IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007585 respiratory gaseous exchange IEA
 biological_processGO:0008344 adult locomotory behavior IEA
 biological_processGO:0021516 dorsal spinal cord development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048666 neuron development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0001205 transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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