ENSDARG00000105060


Danio rerio

Features
Gene ID: ENSDARG00000105060
  
Biological name :rdh8b
  
Synonyms : rdh8b / retinol dehydrogenase 8b
  
Possible biological names infered from orthology : RDH8 / retinol dehydrogenase 8 (all-trans)
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 59293873
Gene end: 59303460
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000140077
NCBI entrez gene - 393761     See in Manteia.
RefSeq - NM_200788
RefSeq Peptide - NP_957082
swissprot - F1QT23
ZFIN ID - ZDB-GENE-040426-1759
Ensembl - ENSDARG00000105060
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RDH8ENSG00000080511Homo sapiens
 Rdh8ENSMUSG00000053773Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rdh8a / retinol dehydrogenase 8a / RDH8* / retinol dehydrogenase 8 (all-trans)*ENSDARG0000002804872
zgc:109982ENSDARG0000009921752
zmp:0000001048ENSDARG0000001621350
hsd17b1 / hydroxysteroid (17-beta) dehydrogenase 1 / P14061* / P51656*ENSDARG0000002746938
dhrs7b / dehydrogenase/reductase (SDR family) member 7B / Q6IAN0* / Q99J47* / dehydrogenase/reductase 7B*ENSDARG0000007572625
bdh1 / 3-hydroxybutyrate dehydrogenase, type 1 / Q80XN0* / Q02338* / 3-hydroxybutyrate dehydrogenase 1* / D-beta-hydroxybutyrate dehydrogenase, mitochondrial *ENSDARG0000005938822
kdsr / 3-ketodihydrosphingosine reductase / Q06136* / Q6GV12*ENSDARG0000001202121
rdh1 / retinol dehydrogenase 1ENSDARG0000001788221
hsd11b2 / hydroxysteroid (11-beta) dehydrogenase 2 / P51661* / P80365*ENSDARG0000000197521
dhrs7 / dehydrogenase/reductase (SDR family) member 7 / Gm4756* / Q9CXR1* / Q9Y394* / dehydrogenase/reductase 7*ENSDARG0000000344421
rdh5 / retinol dehydrogenase 5 (11-cis/9-cis) / Q92781* / O55240* / retinol dehydrogenase 5* / Mus musculus retinol dehydrogenase 5 (Rdh5), transcript variant 2, mRNA.*ENSDARG0000000830620
dhrs7ca / dehydrogenase/reductase (SDR family) member 7Ca / Q8CHS7* / DHRS7C* / A6NNS2* / dehydrogenase/reductase 7C* / Dehydrogenase/reductase SDR family member 7C *ENSDARG0000003945319
dhrs9 / dehydrogenase/reductase (SDR family) member 9 / Q58NB6* / Q9BPW9* / dehydrogenase/reductase 9*ENSDARG0000001926019
zgc:113142ENSDARG0000003896919
hsd17b2 / hydroxysteroid (17-beta) dehydrogenase 2 / P37059* / P51658*ENSDARG0000004555317
A8E5C5 / dhrs7cb / dehydrogenase/reductase (SDR family) member 7Cb / Q8CHS7* / DHRS7C* / A6NNS2* / dehydrogenase/reductase 7C* / Dehydrogenase/reductase SDR family member 7C *ENSDARG0000007187717


Protein motifs (from Interpro)
Interpro ID Name
 IPR002347  Short-chain dehydrogenase/reductase SDR
 IPR011348  17beta-dehydrogenase
 IPR016040  NAD(P)-binding domain
 IPR020904  Short-chain dehydrogenase/reductase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006703 estrogen biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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